Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional regulator CynR from Escherichia coli ECRC101

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 3/235 (1%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M  + + Y + V  H  + +  A  L+ SQP +S+Q+R LE+ LG+ +F+RSG+ +  +T
Sbjct: 1   MLSRHINYFLAVAEHG-SFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTI-HLT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AGE   + A+  L  + + K    +      G+L I+ T T   Y +  ++  F  RYP
Sbjct: 59  DAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
            ++L + + +  ++ + + +   +  IA   +HL  +   +P    + ++VV + HPL  
Sbjct: 119 GITLQLQEMSQEKIEDLLCRDELDVGIAFAPVHL-PELEAIPLLTESLALVVAQHHPLAA 177

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVR 235
            EQV +  L    LV     F  R ++D    + G+ P+VV  A     +   +R
Sbjct: 178 CEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIR 232