Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., DNA-binding transcriptional regulator OxyR from Dickeya dadantii 3937

 Score =  105 bits (262), Expect = 1e-27
 Identities = 66/255 (25%), Positives = 126/255 (49%), Gaps = 3/255 (1%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M ++ L+Y+V +  H  +    A++ + SQP +S Q+R LEDELG+ + ER+ + +   T
Sbjct: 1   MNIRDLEYLVALAEHR-HFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVL-FT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AG  +V  A  +L  V+ +K +A++      G L+I    T   Y LP++I    + +P
Sbjct: 59  QAGLLLVEQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPQIIPMLHRTFP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           ++ +++H+    Q+   +  G  + AI    +   +  I +P +     + + +DHP   
Sbjct: 119 KLEMYLHEAQTHQLLAQLDSGKLDCAILA-MVKESEAFIEVPLFDEPMKLAIYQDHPWAN 177

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
           +E+V + DL+   L+    G   R +      + G      F AT  + ++  V  G G+
Sbjct: 178 RERVAMSDLSGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGI 237

Query: 241 GVIASMAVDKKQDTD 255
            ++ S+AV  ++  D
Sbjct: 238 TLLPSLAVPPERVRD 252