Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., HTH-type transcriptional regulator SsuR from Acinetobacter radioresistens SK82

 Score =  253 bits (647), Expect = 3e-72
 Identities = 126/293 (43%), Positives = 188/293 (64%), Gaps = 1/293 (0%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M  QQL+ I E V  N N++  +  LYTSQ G+SK ++ LEDELG+Q+F R GK L  +T
Sbjct: 1   MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
             G+ ++ I   +L   E+IK +A +    + GTL I+TTHTQARY LP ++  F K +P
Sbjct: 61  EPGQSLLNIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKAFP 120

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           +V L + Q +P ++SE + +G A+  IATE+L   ++   +P Y W  SI+ P+ HPLT+
Sbjct: 121 KVHLILQQASPVEISEMLLQGEADIGIATESLTTEENLASVPYYTWEHSIITPQHHPLTQ 180

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
            E + +EDLA YP++TY  GFTGRS++D AF    +   +V +A DADVIKTYV +G+GV
Sbjct: 181 LENIRLEDLANYPIITYHGGFTGRSKIDKAFEAANIEVDIVMSALDADVIKTYVELGMGV 240

Query: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAP 293
           G++ ++A D ++D  L  I  + IF  +TT +  R+G  LR Y ++F+   +P
Sbjct: 241 GIVNNVAYDAERDYRLKQIQ-TDIFGLNTTWLAVRKGHLLRGYGYEFISLCSP 292