Pairwise Alignments

Query, 530 a.a., Na+/H+ antiporter NhaB from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., sodium/proton antiporter NhaB from Pseudomonas sp. SVBP6

 Score =  605 bits (1559), Expect = e-177
 Identities = 304/501 (60%), Positives = 384/501 (76%), Gaps = 1/501 (0%)

Query: 1   MPMSLGNAFIKNFLGKAPDWYKVAIIAFLIINPIVFFFINPFLAGWLLVVEFIFTLAMAL 60
           M  SL  A   NFLG++P WYK  +  FL++NP++ F + P +AGW+LV+EFIFTL MAL
Sbjct: 1   MSRSLAGALAHNFLGQSPRWYKATLCLFLLLNPLLLFTLGPVVAGWVLVIEFIFTLGMAL 60

Query: 61  KCYPLQPGGLLAIEAIAIGMTSPGQVKHELVANIEVLLLLVFMVAGIYFMKQLLLFIFTK 120
           KCYPL PGGLL +EA+ +GMT+P  +  EL  N  V+LLL+FMVAGIYFMK LLLF+F++
Sbjct: 61  KCYPLMPGGLLMVEALLLGMTTPQALYEELQHNFPVILLLMFMVAGIYFMKDLLLFLFSR 120

Query: 121 ILLGIRSKVLLSIAFSVTAAFLSAFLDALTVIAVIISVAVGFYSIYHKVASGQSVHSSHD 180
           ILLG+RSK LL++ F   +AFLSAFLDALTV AVIIS AVGFYS+YH+VASG +     D
Sbjct: 121 ILLGVRSKTLLALLFCFLSAFLSAFLDALTVTAVIISAAVGFYSVYHRVASGGNPREESD 180

Query: 181 HTHDEGISELTRDDLENYRAFLRSLLMHAGVGTALGGVTTMVGEPQNLIIADQAGWQFGE 240
              D+ I+ L R+DL+ +RAFLRSLLMH  VGTALGGV T+VGEPQNL+I  + GW F E
Sbjct: 181 LDSDQQIAHLHREDLQQFRAFLRSLLMHGAVGTALGGVCTLVGEPQNLLIGHEMGWHFAE 240

Query: 241 FLLRMAPVTVPVFIAGMLTCMLVEKFRIFGYGARLPANVRQILLDFDSEERKNRTNQDVA 300
           F L++APV++PV +AG++TC+L+EK R FGYG  LP  VRQ+L  + +E+   RT Q  A
Sbjct: 241 FFLKVAPVSLPVLVAGLVTCVLLEKLRWFGYGTLLPDTVRQVLATYAAEDDAQRTTQQRA 300

Query: 301 KLWVQGAIAVWLIVGLALHLAAVGLIGLSVIILATAFTGVIEEHSLGKAFEEALPFTALL 360
            L VQG  A+ LI+GL LH+A VGLIGL VI+L TAFTG+ +EH LG+AF++A+PFTALL
Sbjct: 301 ALLVQGLAALILIIGLGLHVAEVGLIGLLVIVLITAFTGITDEHRLGRAFQDAMPFTALL 360

Query: 361 AVFFSIVAVIIDQELFKPVIDAVLNVEDHGTQLALFYVANGLLSMVSDNVFVGTVYITEV 420
            VFF++VAVI  Q+LF P+I  VL +     Q  + ++ANGLLS +SDNVFV T+YITEV
Sbjct: 361 VVFFAVVAVIHQQQLFTPLIQWVLAL-PADQQPGMLFIANGLLSAISDNVFVATIYITEV 419

Query: 421 KTALMEGMISRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVI 480
           K A + G +SR+ F+ LAVAINTGTNLPSVATPNGQAAFLFLLTSA+APLIRLSYGRMV 
Sbjct: 420 KQAFVNGGMSREHFETLAVAINTGTNLPSVATPNGQAAFLFLLTSAIAPLIRLSYGRMVW 479

Query: 481 MAFPYTLALSLVGFIGIMFLL 501
           MA PYT+ +  +G+  + + L
Sbjct: 480 MALPYTVVMGGLGWWAVTYWL 500