Pairwise Alignments

Query, 530 a.a., Na+/H+ antiporter NhaB from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., NhaB sodium/proton transporter (Katherine Huang) from Escherichia coli BW25113

 Score =  687 bits (1772), Expect = 0.0
 Identities = 353/515 (68%), Positives = 416/515 (80%), Gaps = 4/515 (0%)

Query: 1   MPMSLGNAFIKNFLGKAPDWYKVAIIAFLIINPIVFFFINPFLAGWLLVVEFIFTLAMAL 60
           M +S G A  +NFLG++PDWYK+A+I FLI+NP++F  I+PF+AGWLLV EFIFTLAMAL
Sbjct: 1   MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFL-ISPFVAGWLLVAEFIFTLAMAL 59

Query: 61  KCYPLQPGGLLAIEAIAIGMTSPGQVKHELVANIEVLLLLVFMVAGIYFMKQLLLFIFTK 120
           KCYPL PGGLLAIEA+ IGMTS   V+ E+ AN+EVLLLL+FMVAGIYFMKQLLLFIFT+
Sbjct: 60  KCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTR 119

Query: 121 ILLGIRSKVLLSIAFSVTAAFLSAFLDALTVIAVIISVAVGFYSIYHKVASGQSVHSSHD 180
           +LL IRSK+LLS++F V AAFLSAFLDALTV+AV+ISVAVGFY IYH+VAS ++  +  D
Sbjct: 120 LLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRTEDT--D 177

Query: 181 HTHDEGISELTRDDLENYRAFLRSLLMHAGVGTALGGVTTMVGEPQNLIIADQAGWQFGE 240
              D  I +  +  LE +R FLRSL+MHAGVGTALGGV TMVGEPQNLIIA  AGW FG+
Sbjct: 178 LQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGD 237

Query: 241 FLLRMAPVTVPVFIAGMLTCMLVEKFRIFGYGARLPANVRQILLDFDSEERKNRTNQDVA 300
           F LRM+PVTVPV I G+LTC+LVEK R FGYG  LP  VR++L  FD + R  RT QD  
Sbjct: 238 FFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKVREVLQQFDDQSRHQRTRQDKI 297

Query: 301 KLWVQGAIAVWLIVGLALHLAAVGLIGLSVIILATAFTGVIEEHSLGKAFEEALPFTALL 360
           +L VQ  I VWL+  LALHLA VGLIGLSVIILAT+ TGV +EH++GKAF E+LPFTALL
Sbjct: 298 RLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSLTGVTDEHAIGKAFTESLPFTALL 357

Query: 361 AVFFSIVAVIIDQELFKPVIDAVLNVEDHGTQLALFYVANGLLSMVSDNVFVGTVYITEV 420
            VFFS+VAVIIDQ+LF P+I  VL   +H  QL+LFY+ NGLLS +SDNVFVGT+YI E 
Sbjct: 358 TVFFSVVAVIIDQQLFSPIIQFVLQASEH-AQLSLFYIFNGLLSSISDNVFVGTIYINEA 416

Query: 421 KTALMEGMISRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVI 480
           K A+  G I+  Q++LLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMV 
Sbjct: 417 KAAMESGAITLKQYELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVW 476

Query: 481 MAFPYTLALSLVGFIGIMFLLEPMTEVFYSLGWIS 515
           MA PYTL L+LVG + + F L P+TE F  +GWI+
Sbjct: 477 MALPYTLVLTLVGLLCVEFTLAPVTEWFMQMGWIA 511