Pairwise Alignments

Query, 530 a.a., Na+/H+ antiporter NhaB from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., Sodium/proton antiporter NhaB from Alteromonas macleodii MIT1002

 Score =  698 bits (1802), Expect = 0.0
 Identities = 352/524 (67%), Positives = 430/524 (82%), Gaps = 5/524 (0%)

Query: 1   MPMSLGNAFIKNFLGKAPDWYKVAIIAFLIINPIVFFFINPFLAGWLLVVEFIFTLAMAL 60
           M  S+  A  KNFLG APDWYK  IIAFLI+NP +F  ++P++AGW LV++FIFTLAMAL
Sbjct: 1   MQTSMIAAIYKNFLGHAPDWYKKTIIAFLIVNPFIFM-VDPYVAGWTLVIQFIFTLAMAL 59

Query: 61  KCYPLQPGGLLAIEAIAIGMTSPGQVKHELVANIEVLLLLVFMVAGIYFMKQLLLFIFTK 120
           KCYPLQPGGLL IEA+ IGMTSPG + HE+  N+EVLLLLVFMVAGIYFMK LL+++FTK
Sbjct: 60  KCYPLQPGGLLLIEAMFIGMTSPGHMMHEIEVNLEVLLLLVFMVAGIYFMKDLLMYLFTK 119

Query: 121 ILLGIRSKVLLSIAFSVTAAFLSAFLDALTVIAVIISVAVGFYSIYHKVASGQSVHSSHD 180
           +++ +R+K++LS++F   +AFLSAFLDALTV+AVIISV +GFYSIYHKVASG+  HS HD
Sbjct: 120 LVIKVRNKLILSLSFIFASAFLSAFLDALTVVAVIISVGLGFYSIYHKVASGKEFHSDHD 179

Query: 181 HTHDEGISELTRDDLENYRAFLRSLLMHAGVGTALGGVTTMVGEPQNLIIADQAGWQFGE 240
           HT D+   EL   DLE++RAFLR+L+MH+ VGTALGGV TMVGEPQNLIIAD+AGW F E
Sbjct: 180 HTSDD---ELGSHDLEDFRAFLRNLMMHSAVGTALGGVMTMVGEPQNLIIADKAGWDFVE 236

Query: 241 FLLRMAPVTVPVFIAGMLTCMLVEKFRIFGYGARLPANVRQILLDFDSEERKNRTNQDVA 300
           F +RMAPVT+PVF+ G+LT +++EK  +F YGA+LPA VRQIL+D++    K R+ ++ A
Sbjct: 237 FFIRMAPVTIPVFVFGLLTTVILEKTGMFSYGAKLPAAVRQILVDYNDHMDKGRSKRETA 296

Query: 301 KLWVQGAIAVWLIVGLALHLAAVGLIGLSVIILATAFTGVIEEHSLGKAFEEALPFTALL 360
           KL VQ  I VWLI+GLA H+A+VGLIGLSVI+LAT+ +GVIEEH+LGKAFEEALPFTALL
Sbjct: 297 KLIVQALIGVWLIIGLATHMASVGLIGLSVIVLATSMSGVIEEHALGKAFEEALPFTALL 356

Query: 361 AVFFSIVAVIIDQELFKPVIDAVLNVEDHGTQLALFYVANGLLSMVSDNVFVGTVYITEV 420
            VFF +VAVIIDQ LF+PVI  VL+ E   TQ+ +FY+ANG+LSMVSDNVFVG+VYITEV
Sbjct: 357 CVFFGVVAVIIDQGLFQPVIHWVLSFEGE-TQMVMFYLANGVLSMVSDNVFVGSVYITEV 415

Query: 421 KTALMEGMISRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVI 480
             AL  G I+RDQ+D+LAVAINTGTNLPSVATPNGQAAFLFLLTSA+APL+RLSYGRMV+
Sbjct: 416 TAALQAGQITRDQYDMLAVAINTGTNLPSVATPNGQAAFLFLLTSAIAPLLRLSYGRMVM 475

Query: 481 MAFPYTLALSLVGFIGIMFLLEPMTEVFYSLGWISHHVAPAADA 524
           MA PYT+ L++VG +     L   T+V Y +  I HH A  A A
Sbjct: 476 MALPYTIVLTIVGLLATYIGLADATQVLYDMHLIEHHSAAEAGA 519