Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  211 bits (537), Expect = 8e-59
 Identities = 131/410 (31%), Positives = 221/410 (53%), Gaps = 17/410 (4%)

Query: 273 RAALYNNIANLANEVDKA--MTILGAFNQTATDDLNQ--------SLAEAGSVYQQGAIK 322
           R+A+ N  A  AN V     MT  GA   T +D L +          A+A S+     + 
Sbjct: 237 RSAVQNYKAANANIVTARAEMTTQGADIVTISDKLYEIQLTRRDAESAQARSLQLISTLL 296

Query: 323 AVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRH 382
           A+++G+   L+ T         +  P+   L  +E +  G+++  I++   +E   L + 
Sbjct: 297 ALLVGVIAALVIT-------RQITRPIQETLAVVERIASGDLSHNIQVTRRDELGVLQQG 349

Query: 383 INSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHS 442
           I  +   L +++  +      + + A      +      +NSQ+ +T  VA AM EM  +
Sbjct: 350 IQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTAT 409

Query: 443 VQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQI 502
           VQEVA +A+ +       +  + +G ++++  I+ I +L   +  S +A+  L++ S++I
Sbjct: 410 VQEVARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKI 469

Query: 503 GSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMI 562
           GS++DVI+ +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT +ST EIE ++
Sbjct: 470 GSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLV 529

Query: 563 SNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQN 622
           + LQ+ +   + V+ +     + SVE    A  ++E I   +  I  M+  I+ AA +Q+
Sbjct: 530 AGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQS 589

Query: 623 ETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
                I+RSI ++  +S+++  A  + A++S  L  L +Q  ++V  F++
Sbjct: 590 AVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHFRV 639