Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  214 bits (545), Expect = 1e-59
 Identities = 150/476 (31%), Positives = 246/476 (51%), Gaps = 16/476 (3%)

Query: 208 SDVAFVEKAVNQNKKAVTHLNYAYRGLTTQMPQLKERFDEPVAKFTQDIGQKGGV----L 263
           + V  + K + Q +  V    Y+ + +  + P L +  D  V K T+  GQ        L
Sbjct: 168 NSVVDLSKLIQQARFQVRGYTYSAK-VEAEQPAL-DAIDNAVKKITELQGQLPAQYQANL 225

Query: 264 DQHNEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKA 323
           ++ +  LQA  A  +   +       A+ I+ A   T     ++       V    A  A
Sbjct: 226 EEASTSLQAYRAAVSQYRDSQTAAAAALKIMSAQGDTLLGHSDKLTLSQTVVRDADAAHA 285

Query: 324 VVIGIAVVLLATAIG----YHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRL 379
             + +   +LA   G    + I   +  P+ + L+  + +  G+++  +     +E  +L
Sbjct: 286 KQLLLLATVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQL 345

Query: 380 SRHINSLADNLHDILVKLNSASDDLTATAST-NQTTSLSAQNK--LNSQREQTSSVAAAM 436
            R + S+   L +++      SD +T  AS   Q ++++ Q    +NSQ+ +T  VA AM
Sbjct: 346 QRAMQSMTVGLRELI---GGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAM 402

Query: 437 TEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLR 496
            EMA +VQEVA +A+ +       +  +  G +++   I+ I +L T +  S  A+GDL+
Sbjct: 403 NEMAATVQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLK 462

Query: 497 KMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTS 556
           + S +IGS+LDVI+++A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT +ST 
Sbjct: 463 RESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTE 522

Query: 557 EIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQ 616
           EIE +I  LQS +   + ++++     + SVE    A SA+  I   +  I  M++ I+ 
Sbjct: 523 EIEELIVGLQSGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIAT 582

Query: 617 AAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           AA +Q+     I RS+ ++  +S+++  A  + A +S  L  L      LV RF++
Sbjct: 583 AAEQQSAVAEEINRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGRFRV 638