Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  212 bits (540), Expect = 3e-59
 Identities = 121/353 (34%), Positives = 209/353 (59%), Gaps = 2/353 (0%)

Query: 322 KAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQRIEIRYNNEFSRL 379
           KA  IG+A+ L+   +   IA S+  P+   +  + ++  G  ++T+ ++    +E ++L
Sbjct: 192 KASFIGLAIALVMALLVSLIARSIVRPLQAAVNAMGNIASGESDLTRSLDTHGQDEVTQL 251

Query: 380 SRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEM 439
           SRH NS    L  ++ +L   ++ L  ++    + +  A ++   Q +Q   VA A+ E+
Sbjct: 252 SRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQSQQMELVATAINEV 311

Query: 440 AHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMS 499
            + VQ+VA +A+++ + ++  +  ++ G+  + +++  I QL   + ++VE +  L   S
Sbjct: 312 TYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTISQAVEVIRTLSAES 371

Query: 500 SQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIE 559
           +QIGS+L+VIR+IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LAQRT +ST+EI+
Sbjct: 372 TQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQ 431

Query: 560 SMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAG 619
            MI  LQ  S  A KVI       ++++EQA  A +++  I   +  ++ ++  I+ A  
Sbjct: 432 GMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRNLNGLNASIASATL 491

Query: 620 EQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           +Q      I +++ +   +S  +  A  Q +  SA+L  L+ Q   L+ +FK+
Sbjct: 492 QQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQLDGLLRQFKV 544