Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  206 bits (525), Expect = 2e-57
 Identities = 139/467 (29%), Positives = 249/467 (53%), Gaps = 13/467 (2%)

Query: 215 KAVNQNKKAVTHLNY-------AYRGLTTQMPQLKERFDEPVAKFTQDIGQKGGV--LDQ 265
           +A+ QN++ +T +          Y+GL   +P  +  FD   A+  + + ++  V  L +
Sbjct: 79  QALAQNEQKLTEIKANLHRARTLYQGLIV-LPAEQVLFDRFKAEEARYLERQEQVVTLSK 137

Query: 266 HNEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKAVV 325
            N+   A   +   +  LA+E+   +  L   N+T+    NQ+ + A SV+ Q  I  + 
Sbjct: 138 ANQLEDAIRVVNGEMNQLADEMAATLRELVTLNKTSA---NQAASLAQSVFSQSRIWVIG 194

Query: 326 IGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINS 385
           + +   L+   +   +  S+  P+ + LK  + +  G++T  I +   +E +RL + + S
Sbjct: 195 MIVLTALVTIGLAVLLTRSIVLPLAQSLKVAQGVASGDLTGEISVCGRDEPARLQQALKS 254

Query: 386 LADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQE 445
           + +NL D + +++ +S+ L + +      +  A   L+ Q ++    A A+ +M  +V+E
Sbjct: 255 MQENLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQSQEIEQAATAVNQMTAAVEE 314

Query: 446 VANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSI 505
           VA++A  +    ++ +  ++ GR+ +   + +I  L T + ++V  V DL +    I  +
Sbjct: 315 VASNAVATSQASRESDRIAQRGREQVQQTVVSIEALATDVTDNVTQVEDLAQKVYGISKV 374

Query: 506 LDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNL 565
           LDVIR+IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT QST EIE MIS +
Sbjct: 375 LDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMISGI 434

Query: 566 QSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETT 625
           Q  +  A   ++        +++ A  A +A+EEI +    I+  +  I+ A+ +Q    
Sbjct: 435 QQGTDQAVSSMQQSNTRARSTLDIAKSAGTALEEIASAFTLINERNLVIASASEQQAAVA 494

Query: 626 TSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
             + R++ +I  ++ ++    +Q +  S +L+ LA   + LV RF +
Sbjct: 495 REVDRNLMNIRDLAHQTSTGANQTSAASHDLSRLAVDLNTLVARFSV 541