Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  198 bits (504), Expect = 5e-55
 Identities = 120/364 (32%), Positives = 201/364 (55%), Gaps = 1/364 (0%)

Query: 310 AEAGSVYQQGAIKAVVIGIAVV-LLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRI 368
           A A    +  A+  ++ GI +  L+A  IG  I   +  P+ + +++ + + QG++TQ I
Sbjct: 177 AVAADELRNSALTWMISGIVLAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLTQAI 236

Query: 369 EIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQ 428
                +E  +L   ++ +   L   LV++ +ASD L + A      +  +   L  Q ++
Sbjct: 237 ITERTDEAGQLLMALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDE 296

Query: 429 TSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIES 488
               A A+ +M  +V EVA++A ++    +Q  T +E GRQ +   +S +  +   + +S
Sbjct: 297 IQQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDS 356

Query: 489 VEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLA 548
            ++V DL     +IG ++DVIR IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA
Sbjct: 357 TQSVADLAGQVREIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 416

Query: 549 QRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEIS 608
            RT  ST +IE MI ++Q+ +  A   +   +     +   A +A  A++ I A + +I+
Sbjct: 417 HRTQISTVDIEKMIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKIN 476

Query: 609 HMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVH 668
             +  I+ A+ EQ +    + R++ +I  +S ++     Q   +S +L+ LA   + LV 
Sbjct: 477 ERNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVS 536

Query: 669 RFKL 672
           +F+L
Sbjct: 537 KFQL 540