Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  262 bits (669), Expect = 4e-74
 Identities = 206/678 (30%), Positives = 326/678 (48%), Gaps = 40/678 (5%)

Query: 13  SVIRRMYAGFALIIIMFVVTVAIMLRGMNQIHSNFESVSTAALPLVSLSNQTSVQLLSAD 72
           S+++R+ AGF L++++ ++   I    +  I+     VS  A PLV         L  ++
Sbjct: 4   SIVQRIIAGFVLMLLLLILLGVISTLKIRGINDGLSEVSDRATPLVMAVAGLKEALQESN 63

Query: 73  KSFKDFLTTQDTSLMDGMRQEFAQSKQRFQSVLAELSQASVNHPELAQPITELKQLETRY 132
           +   +F T+++   +  +  +F   + RF+  L++   A  +  E  +   ++ Q   ++
Sbjct: 64  RWVLEFRTSEEAGELPQLSNKFKDQQARFRQ-LSQQMNALTDSTESQKQFQDVLQATNQF 122

Query: 133 FSEADLAMDNYQAMFAAQASVQKSTREFQRLHSELSVGMKEFVDDNDSISVKVMAKSYFI 192
           +S+AD  +  +     A A  +K    F RL           +  +         +S   
Sbjct: 123 YSQADQVLTQHSEWVNALAQRRKLEIAFIRLEDTYQWAADLLLQQSSG------QRSMRN 176

Query: 193 KLKDAEVITSDALASSDVAFVEKAVNQNKKAVTHLNYAYRGLTTQMPQLKERFDEPVAKF 252
           K   AE+ITS    + D+  + +A      A T LN   + L+  +   ++R D  +   
Sbjct: 177 K---AELITSGI--ARDLKNIRRA-----DAKTDLNELEKVLSKDIEMARKRLDRVLVP- 225

Query: 253 TQDIGQKGGVLDQHNEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAE- 311
             D+  K   +   N  LQ  A   N +     +  +    L   NQ     L  SLA+ 
Sbjct: 226 -DDV--KARYIANLNR-LQELALGQNGLLATMRKAQQLENALLIQNQQVDASLASSLAKL 281

Query: 312 ------AGSVYQQGAIKA-----------VVIGIAVVLLATAIGYHIAHSVREPVTRILK 354
                 AGS+ QQ  + A           + +      +A  IGY  A S+++P+ +I  
Sbjct: 282 DDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINH 341

Query: 355 TLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTT 414
            L  + +G+MT+RI      EF  LSR I+ LAD   ++L ++N+ S  L   AS +   
Sbjct: 342 ELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEI 401

Query: 415 SLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTN 474
           S  A  ++  Q+ QT  VAAA+TE+  S  EVA S   +   V + +  ++ GRQ ++T 
Sbjct: 402 SERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATT 461

Query: 475 ISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQG 534
                QL + +  +V     L + S+ IGSILDVIR IAEQTNLLALNAAIEAARAG+ G
Sbjct: 462 RRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAG 521

Query: 535 RGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHAN 594
           RGFAVVADEVR LA RT  ST EI+ MI NLQ SS    +V+    +     VEQ    +
Sbjct: 522 RGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMD 581

Query: 595 SAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSA 654
           SA++ I   +  I  M+  ++ AA EQ   + S+A  +  I  ++ E+ +   + A +S 
Sbjct: 582 SALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSE 641

Query: 655 NLTALANQQSELVHRFKL 672
            L  LA +Q +L+  FK+
Sbjct: 642 VLADLAAKQQQLIAHFKV 659