Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  206 bits (525), Expect = 2e-57
 Identities = 144/444 (32%), Positives = 238/444 (53%), Gaps = 19/444 (4%)

Query: 239 PQLKERFDEPVAKFTQDIGQKGGVLDQHNEYLQARAALYNNIANLANEV--DKAMTILGA 296
           P+LKE+  +  A+F Q       V ++    LQA A   NN    A  +  DK     G 
Sbjct: 114 PELKEQARKLQARFEQM------VREELEPMLQAFA---NNDMTTAQNIYRDKYAPTYGE 164

Query: 297 FNQTATDDLNQSLAEA-----GSV--YQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPV 349
             + A   L+  L +A      SV  ++ G  K +VI  A ++++      I  ++R  V
Sbjct: 165 MRKQANQILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRV 224

Query: 350 TRILKTLESLTQG-NMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATA 408
             +   + S     ++  R+E+  N+E   + +  N+  D +H  + ++   S +L   A
Sbjct: 225 AYLKDRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMA 284

Query: 409 STNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGR 468
           S+    +   Q+   SQR++T  VA A+ E+  +V E+A++A  +  + +Q    S  G+
Sbjct: 285 SSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGK 344

Query: 469 QIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAA 528
           +++    + I+ L   L  + + V  L    + I S LD IR+I+EQTNLLALNAAIEAA
Sbjct: 345 KVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAA 404

Query: 529 RAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVE 588
           RAGEQGRGFAVVADEVR LA R+  ST EI+ +I+ LQ+ S+ A + +E      ++ VE
Sbjct: 405 RAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVE 464

Query: 589 QASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQ 648
            ++ AN ++ EI + I +I+  +  ++ A  EQ+     I R++EDIN ++ E+     +
Sbjct: 465 FSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADE 524

Query: 649 IAQTSANLTALANQQSELVHRFKL 672
           +++ SA+L  L++Q  +LV  F+L
Sbjct: 525 LSRASASLQRLSSQLDKLVGSFEL 548