Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (565), Expect = 4e-62
 Identities = 156/524 (29%), Positives = 259/524 (49%), Gaps = 30/524 (5%)

Query: 170 GMKEFVDDNDSISVKVMAKSYFIKLKDAEVITSDALASSDVAFVEKAVNQNKKAVTH--- 226
           GM+   D  +S+  K M  +    ++   ++     A S +    +    +K A+ H   
Sbjct: 78  GMQSASDSIESLYTKGMQHT----IRAGRILDELGSARSQLLLAFQHDPSSKYALMHDHP 133

Query: 227 LNYAYRGLTTQMPQLKERFDEPVAKFTQDIGQKGGV------LDQ--------------H 266
           +     G+ T +  L    D  +     D+ +K  +      LDQ               
Sbjct: 134 ITMHVEGIQTSLTNLHRIVDNEILATVLDVQEKAVIQTLKEKLDQVTRQGFEPALQQLKA 193

Query: 267 NEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKAVVI 326
            +Y  A   L   I  L NE+ KA     AF    T +   + + +     Q      ++
Sbjct: 194 EKYDAANLILLQVINPLYNEIKKAAE---AFLDIQTQEGKNNFSASQHEINQFIWMVSLL 250

Query: 327 GIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSL 386
           G   +++ T++   IA  V   V  +  +   +  G++TQRI +  N+EFS +++++N +
Sbjct: 251 GAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRI 310

Query: 387 ADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEV 446
             +  +++     +   L   A  N   ++  +  +  Q+ QT  +AAA+ +   +V EV
Sbjct: 311 VTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEV 370

Query: 447 ANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSIL 506
           A SA  +    ++ E A+  GR+++  NI+ I  L   L + + A+  L K S  IGS++
Sbjct: 371 AQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVV 430

Query: 507 DVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQ 566
           DVI++I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT +ST +I   +  LQ
Sbjct: 431 DVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQ 490

Query: 567 SSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTT 626
            SS  ++ +IE  +     +VE+A  A +A+ +I A +  IS M+T I+ A+ EQ+  T 
Sbjct: 491 QSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTE 550

Query: 627 SIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRF 670
            I ++I  I+ IS+++     Q ++ +  L  LA    + V R+
Sbjct: 551 EINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594