Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  221 bits (564), Expect = 6e-62
 Identities = 174/661 (26%), Positives = 313/661 (47%), Gaps = 36/661 (5%)

Query: 13  SVIRRMYAGFALIIIMFVVTVAIMLRGMNQIHSNFESVSTAALPLVSLSNQTSVQLLSAD 72
           SV R++  GF L++++   T+AI L G + + S  +      L  +S+  Q + +L  A 
Sbjct: 13  SVNRKLGLGFGLVLLL---TLAITLTGWHGMDSIIDRGD--KLGNISVIQQYTQELRIAR 67

Query: 73  KSFKDFLTTQDTSLMDGMRQEFAQSKQRFQSVLAELSQASVNHPELAQPITELKQLETRY 132
           + +      +D + +  + +  +   ++ Q +L ++ Q + +H  L Q   E  ++  + 
Sbjct: 68  QQYD---RRRDDASLAELEKALSNLDRQVQLMLGQIEQPA-DHQRLEQQ-REAVRIYQQA 122

Query: 133 FSEADLAMDNYQA-MFAAQASVQKSTREFQRLHSELSVGMKEFVDDNDSISVKVMAKSYF 191
           F+E   A    +A      +S  K+     R+   L  G         +I+    A    
Sbjct: 123 FNELKQADQRREASRDVLGSSADKAVDLIGRVQRSLLQGA--------NINQYQHAVDVS 174

Query: 192 IKLKDAEVITSDALASSDVAFVEKAVNQNKKAVTHLNYAYRGLTTQMPQLKERFDEPVAK 251
             L+ A         S +  + + A+    +A+  L    R L  ++P       E  A 
Sbjct: 175 ALLQQARFQVRGYTYSGNADYQQTALKAIDQALAEL----RALPAKVPA------EHAAS 224

Query: 252 FTQDIGQKGGVLDQHNEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAE 311
                   GG  D   ++  A+ A    +  +  +    +        + T+  + + A+
Sbjct: 225 LDDAATAMGGYRDAVTQFGNAQLASEQALQRMVEQGTVLLQASQMMTASQTEVRDAAAAQ 284

Query: 312 AGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIR 371
           A ++     + A+ +G+          + I   +  P+ + L+  E +  G++TQ ++++
Sbjct: 285 AKTLLTVATVLALALGLLA-------AWAITRQIIIPLRQTLRAAERVASGDLTQSLQVQ 337

Query: 372 YNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSS 431
             +E  +L   ++ +   L +++  +      + + A      +      +N+Q+ +T  
Sbjct: 338 RRDELGQLQASMHRMTQGLRELIGGIGDGVTQIASAAEELSAVTEQTSAGVNNQKVETDQ 397

Query: 432 VAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEA 491
           VA AM +M  +V EVA +A+ +       +  +  G +++   ++ I +L + ++ S EA
Sbjct: 398 VATAMNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLASEVVNSSEA 457

Query: 492 VGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRT 551
           +  L+  S +IGS+LDVI+++A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT
Sbjct: 458 MNLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT 517

Query: 552 TQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMS 611
            QST EIE +I+ LQS +   + V+++  Q  + SVE    A S++E I   +  I  M+
Sbjct: 518 QQSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVSSIQAMN 577

Query: 612 THISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFK 671
             I+ AA EQ      I RS+ ++  ISD++  A  + A +S  L  L      LV RF+
Sbjct: 578 QQIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLGTHLQGLVGRFR 637

Query: 672 L 672
           L
Sbjct: 638 L 638