Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  213 bits (543), Expect = 2e-59
 Identities = 177/602 (29%), Positives = 292/602 (48%), Gaps = 47/602 (7%)

Query: 83  DTSLMDGMRQEFAQSKQRFQSVLAELSQASVNHPELAQPITELKQLETRYFSEADLAMDN 142
           DT+  + + +  A SKQ  Q+ LA     +   PE  + + EL    + Y    +     
Sbjct: 73  DTAAANTLAKLDAFSKQ--QAYLA----TTFKSPENVKLLGELGDTISAYKLSLNKMRQG 126

Query: 143 YQAMFAAQASVQKSTREFQRLHSELSVGMKEFVDDNDSISVKVMAKSYFIK----LKDAE 198
           Y A  AA+ S+  S     +    LS   +E +   ++ SV++       K    L    
Sbjct: 127 YDATRAARVSMDSSAIRADQAMDALS---QEVMARPEADSVRLAQYQLISKARQQLLQVR 183

Query: 199 VITSDALASSDVAFVEKAVNQNKKAVTHLNYAYRGLTTQMPQLKERFDEPVAKFTQDIGQ 258
           +     +A +  A  + A+ Q   A+   +   R L ++  +L++               
Sbjct: 184 IDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQF-------------- 229

Query: 259 KGGVLDQHNEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQ 318
           +  VL   +   Q R A+ N   + A      MT+ GA     +D L Q   E   +   
Sbjct: 230 ENAVLAYRDAVRQFRDAVANITTSRAE-----MTVQGADIVKRSDALYQIQLERRDIEST 284

Query: 319 GAIKAVVIGIAVVLLATAIG-YHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEF- 376
            A     I   + LL   +    I   +  P+   L  +E +  G++TQ + +   +E  
Sbjct: 285 QARSLQAIATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELG 344

Query: 377 ------SRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTS 430
                 +R+   +  L   + D + ++ SA+++L+A   T QT++ +     NSQ+ +T 
Sbjct: 345 VLQQGIARMGTTLRELISGIRDGVTQIASAAEELSAV--TEQTSAGA-----NSQKVETD 397

Query: 431 SVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVE 490
            VA AM EMA +VQEVA +A+ +       +  + +G +++   I  I +L   +  S E
Sbjct: 398 QVATAMHEMAATVQEVARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTE 457

Query: 491 AVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQR 550
           A+  L++ S +IGS++DVI+++AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQR
Sbjct: 458 AMNLLQQESQKIGSVMDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQR 517

Query: 551 TTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHM 610
           T +ST EIE +I++LQ  +   +  ++      + SVE A  A S++E I + +  I  M
Sbjct: 518 TQKSTEEIEELIASLQHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSM 577

Query: 611 STHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRF 670
           +  I+ AA +Q+     I+RSI ++  +S+++  A  + A +S  L  L  Q   LV +F
Sbjct: 578 NQQIAAAAEQQSAVAEEISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQF 637

Query: 671 KL 672
           ++
Sbjct: 638 RV 639