Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  215 bits (547), Expect = 5e-60
 Identities = 121/352 (34%), Positives = 208/352 (59%), Gaps = 2/352 (0%)

Query: 323 AVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQRIEIRYNNEFSRLS 380
           A ++G+ + LL   +   IA S+  P+   ++ + ++  G  ++T+R++   ++E + L 
Sbjct: 193 ASLVGVGIALLMALVVMLIARSIARPLQEAVQAMGNIASGESDLTRRLDTHGSDEITHLG 252

Query: 381 RHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMA 440
            H N     L  ++ +L  A+  L  +A      + +AQ +   Q  Q   VA A+ E+ 
Sbjct: 253 EHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGAAQQRSAQQSLQMDQVATAVNEVT 312

Query: 441 HSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSS 500
           ++VQ+VA +A+ +   ++  +     G+Q +  +++ I +L   + E+V+ + DL   S+
Sbjct: 313 YAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQIDRLSLTIDEAVQVIRDLAGHST 372

Query: 501 QIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIES 560
           +IG +LDVIR+IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LAQRT QST+EI +
Sbjct: 373 RIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTAQSTAEIHT 432

Query: 561 MISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGE 620
           MI +LQS S  A K I++  +    +VEQA  A ++++ I  ++  ++ ++  I+ A  +
Sbjct: 433 MIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASLDAINQVLNNLTALNASIASATLQ 492

Query: 621 QNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           Q+     I R++ D   +S ++  A  Q +     L  L+ +  +L+ +F++
Sbjct: 493 QSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALGRLSEELEQLLRQFRV 544