Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  210 bits (535), Expect = 1e-58
 Identities = 148/510 (29%), Positives = 248/510 (48%), Gaps = 19/510 (3%)

Query: 166 ELSVGMKEFVDDNDSISVKVMAKSYFIKLKDAEVITSDALASSDVAFVEKAVNQNKKAVT 225
           ++SV   + +D+  ++++++   SY + L        D L   D         Q    + 
Sbjct: 46  QVSVPSIKILDELTALNLRMRTLSYRLLLNREPATQRDTLDMLD---------QRNSQID 96

Query: 226 HLNYAYRGLTTQMPQLKERFDEPVAKFTQ--DIGQKGGVLDQHNEYLQARAALYNNIANL 283
               AY  +     + +  FD+      Q   +  +   L Q +   + R  L  ++   
Sbjct: 97  RARQAYLPMIVAADE-QAAFDQYGQLLNQYRQLESRMRTLSQADRLDELRDLLNRDLLAN 155

Query: 284 ANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKAVVIG--IAVVLLATAIGYHI 341
           + +++K M  L   N   T   N+  A      Q     A+VIG  +A  +L  A  + +
Sbjct: 156 SEQINKVMDTLVRINTDQTRATNEKAAN-----QYAGAFALVIGLLVAATVLTFACAFLL 210

Query: 342 AHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSAS 401
             S+ +P+   LK  E +  G++T  I     +E +RL R +  + D L D L ++  ++
Sbjct: 211 TRSIVKPIEEALKCAEQVADGDLTHVIRAEGTDEAARLLRAMARMQDKLRDTLQQIAGSA 270

Query: 402 DDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVE 461
             L + A      +  +   L  Q  +    A A+TEM  +V+EVA +A ++     +  
Sbjct: 271 TQLASAAEELNAVTDESARGLQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSEASSEAS 330

Query: 462 TASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLAL 521
            ++  GR ++   +  I ++   +  + + +  L + S  IG +LDVIR +A+QTNLLAL
Sbjct: 331 RSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQTNLLAL 390

Query: 522 NAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQ 581
           NAAIEAARAGE GRGFAVVADEVR LA RT QSTSEIE MI ++Q  +  A + + +  +
Sbjct: 391 NAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQGGTEEAVESMRTSTE 450

Query: 582 DMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDE 641
             E ++  A  A  A++ I   + +I+  +  I+ AA EQ +    + R++ +IN +S +
Sbjct: 451 RAESTLNIARGAGMALDTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVNINDLSVQ 510

Query: 642 SYQAMSQIAQTSANLTALANQQSELVHRFK 671
           S     Q +  SA L+ LA   + LV RF+
Sbjct: 511 SATGAHQTSAASAELSRLAVDLNGLVARFR 540