Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., Methyl-accepting chemotaxis protein McpS from Pseudomonas sp. DMC3

 Score =  208 bits (530), Expect = 5e-58
 Identities = 125/385 (32%), Positives = 209/385 (54%), Gaps = 4/385 (1%)

Query: 288 DKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVRE 347
           D+  TI+    Q     L++  AE+        I + ++ + V ++A  I   I   +  
Sbjct: 259 DQGTTIVALSEQLYQIQLDRRDAESAQARTFQLI-STLLALLVGVIAAVI---ITRQITR 314

Query: 348 PVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTAT 407
           P+   L  +E +  G++TQ + +   +E   L + I  +   L D++  +      + + 
Sbjct: 315 PLQETLAVVERIASGDLTQNVTVTRRDELGVLQQGIARMGVTLRDLISGIRDGVTQIASA 374

Query: 408 ASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESG 467
           A      +      +NSQ+ +T  VA AM EM  +VQEVA +A+ +       +  +  G
Sbjct: 375 AEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASQAAAAADGEAREG 434

Query: 468 RQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEA 527
            ++++  I+ I +L + ++ S EA+  L++ S +IGS++DVI+ +AEQTNLLALNAAIEA
Sbjct: 435 DKVVNEAIAQIERLASEVVRSTEAMSVLQQESDKIGSVMDVIKAVAEQTNLLALNAAIEA 494

Query: 528 ARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSV 587
           ARAGE GRGFAVVADEVR LAQRT +ST EIE +++ LQ+ +   S V+ +     + SV
Sbjct: 495 ARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVSAVMNNSRALTDSSV 554

Query: 588 EQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMS 647
                A +++E I   +  I  M+  I+ AA +Q+     I+RSI ++  +S+++  A  
Sbjct: 555 ALTRKAGASLENITRTVSNIQSMNQQIAAAAEQQSAVAEEISRSIINVRDVSEQTAAASD 614

Query: 648 QIAQTSANLTALANQQSELVHRFKL 672
           + A +S  L  L  Q  ++V  F++
Sbjct: 615 ETAASSVELARLGGQLQQMVSHFRV 639