Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  211 bits (537), Expect = 7e-59
 Identities = 136/419 (32%), Positives = 219/419 (52%), Gaps = 7/419 (1%)

Query: 261 GVLDQHNEYLQARAALYNNIANLANEVDKAMTILGAFNQTAT---DDLNQSLAEAGSVYQ 317
           G L   NE     A     +A     + +  T+    +Q A    D +NQ+     +  Q
Sbjct: 93  GYLTVLNEVSGHIAGFNEKLAEYTGLLAQEKTVYDQLHQRAAQVVDRVNQAYVAEDASMQ 152

Query: 318 QGAIKAVVIGIAVVLLATAIG----YHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYN 373
               K  V+ I    LA  +G    + I   +  P+  +++  + +  G++T ++E+   
Sbjct: 153 AELKKNTVLIIGSSALALLVGLLAAWVITRLIVAPLRSVIRVAQQIAAGDLTAKVEVTRR 212

Query: 374 NEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVA 433
           +E  +L   +  +A  L  I+  L +  + L  +A +    +     ++NSQ+E+T  VA
Sbjct: 213 DEMGQLMLAMQQMAAGLGTIVSGLQAGIERLAGSAQSLSAVTEQTNLEVNSQKEETEQVA 272

Query: 434 AAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVG 493
            AM +M  +V +VA +A+ +    Q  +   ESG+Q++  +++ I QL      +  ++ 
Sbjct: 273 TAMNQMTATVHDVARNAEEAALAAQTADDKVESGQQVVRQSMARIEQLADSATSASSSIE 332

Query: 494 DLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQ 553
            L      IG++L+VI+++AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+RT Q
Sbjct: 333 SLSAEIQNIGTVLEVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTQQ 392

Query: 554 STSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTH 613
           ST EIE ++S L++++  + + I S  + ++L+V  A    SA+  I A +  I  M+  
Sbjct: 393 STEEIERLVSALRAAAQSSVQQIRSSGELVKLAVSDALQTESALGSIAAAVSLIQQMNQQ 452

Query: 614 ISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           I+ AA EQ+     I RS+  I   +D S  AM   A +S  L  L  +   +V  F+L
Sbjct: 453 IAAAAEEQSSVAEEINRSVTQIRASADHSSVAMRGNAASSVELAQLGGELRSMVGHFRL 511