Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  207 bits (527), Expect = 1e-57
 Identities = 123/373 (32%), Positives = 203/373 (54%), Gaps = 12/373 (3%)

Query: 302 TDDLNQSLAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQ 361
           TD  N SL   G          V++ + V +L       I   +++ +  ++++L+ + Q
Sbjct: 177 TDSANTSLISTG----------VILAVVVTILLFGTAVPIVRGIKQSIDDVVRSLKDIAQ 226

Query: 362 --GNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQ 419
             G++T RIE +  +E   L    N   D L  ++  +  AS  L+  A   +  +   Q
Sbjct: 227 ENGDLTVRIETKSEDEIGELVYWFNQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTEETQ 286

Query: 420 NKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIR 479
             ++ Q++  ++   A+  M+ SV  VA+SA  + +   +  TA+  GRQI+   +++I+
Sbjct: 287 RTIDVQQKSATNAKRAVDTMSGSVDGVAHSAAQAASDANEATTAAREGRQIVQQTVTSIQ 346

Query: 480 QLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAV 539
           QL   + E+ + +  L   S+++GS+LDVI+ IAEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 347 QLAENVRETADVIARLESDSNKVGSVLDVIKGIAEQTNLLALNAAIEAARAGEQGRGFAV 406

Query: 540 VADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEE 599
           VADEVR LA RT QST EI+S I  LQ+++  A +V+    +    SVE A+ A S++E 
Sbjct: 407 VADEVRTLASRTQQSTEEIQSTIEQLQNAAHSAVEVMSRGTEQATSSVETANKAGSSLET 466

Query: 600 IQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTAL 659
           I + I  I+ M+  I+    +Q      I R +++I+  ++++     ++      L  L
Sbjct: 467 ITSTIGRINQMNEQIAHNTEDQRTVAVDIVRHVDEIHERTEQTASRSGELGSMCNELADL 526

Query: 660 ANQQSELVHRFKL 672
           A     +  +F++
Sbjct: 527 AQHLESIAKQFRV 539



 Score = 48.1 bits (113), Expect = 1e-09
 Identities = 56/306 (18%), Positives = 128/306 (41%), Gaps = 34/306 (11%)

Query: 363 NMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKL 422
           N    I   + +E SR+S   ++  D  +D+            + +  N T   S   +L
Sbjct: 97  NQIASISPEFRSEISRISSGFDNYFDVAYDV------------SQSMVNGTADFSRLGEL 144

Query: 423 NSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLE 482
           ++Q  Q+   A A        Q+         A  +  +    +   ++ST +  I  + 
Sbjct: 145 SAQMNQSYDGAIAAMSQFRDAQQA--------AFEEAFKNTDSANTSLISTGV--ILAVV 194

Query: 483 TRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAA-RAGEQGRGFAVVA 541
             ++    AV  +R +   I  ++  +++IA++   L +    ++    GE    F    
Sbjct: 195 VTILLFGTAVPIVRGIKQSIDDVVRSLKDIAQENGDLTVRIETKSEDEIGELVYWFNQFM 254

Query: 542 DEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQ 601
           D+++ + +   +++  + ++  NL+        V E   + +++  + A++A  A++ + 
Sbjct: 255 DKLQGVVRDVVEASLPLSNLAQNLRG-------VTEETQRTIDVQQKSATNAKRAVDTMS 307

Query: 602 ALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALAN 661
             +  ++H +   +QAA + NE TT+ AR    I   +  S Q +++  + +A++ A   
Sbjct: 308 GSVDGVAHSA---AQAASDANEATTA-AREGRQIVQQTVTSIQQLAENVRETADVIARLE 363

Query: 662 QQSELV 667
             S  V
Sbjct: 364 SDSNKV 369