Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 704 a.a., ATP-dependent DNA helicase RecG from Rhodanobacter sp000427505 FW510-R12

 Score =  243 bits (619), Expect = 5e-68
 Identities = 153/386 (39%), Positives = 222/386 (57%), Gaps = 19/386 (4%)

Query: 600 ATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAV 659
           A  PF  T  Q      V  D+ Q + M RLV GDVG GKT VA  AA  A ++G QVA+
Sbjct: 276 AGLPFRLTAAQQRVGEEVARDLAQPRPMLRLVQGDVGSGKTVVAALAALAAVESGHQVAL 335

Query: 660 LVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLL 719
           + PT LLA+QH  NFR     L + VE L+   + K ++Q L  VA+G   ++VGTH L+
Sbjct: 336 MAPTELLAEQHLRNFRHWLQPLGVEVEWLAGKVTGKARQQALARVAEG-APVVVGTHALM 394

Query: 720 SSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDI----LTLTATPIPRTLNMAMSGM 775
              + FA LGL+IVDE+HRFGV+Q+  ++    D ++    L LTATPIPRTL M+    
Sbjct: 395 QEGVAFARLGLVIVDEQHRFGVQQRLALRDKGRDGELVPHQLVLTATPIPRTLAMSAYAD 454

Query: 776 RDLSIIATPPARRLAIKTF-VRQSEDSVIREAVLREIMRGGQVYFLHNQVETIDKVAA-- 832
            D+S I   P  R  ++T  +  +  S + E +      G QVY++   +E  +++ A  
Sbjct: 455 LDVSSIDELPPGRTPVQTIAISNARRSDVIERIHAACGEGRQVYWVCTLIEESEQLRAQA 514

Query: 833 ------DLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTAN 886
                 +L   +   R+ + HG+M+ +E + VM+ F      +LV TT+IE G+DVP A+
Sbjct: 515 AEVAYAELSAALAGFRVGLIHGRMKPKEKQAVMDAFKAGELAVLVATTVIEVGVDVPNAS 574

Query: 887 TIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGA 946
            ++++ ++ LGLAQLHQLRGRVGR    +   LL  PP  + + A +RL+    + D   
Sbjct: 575 LMVIENSERLGLAQLHQLRGRVGRGAVASNCVLLYQPP--LGRLARERLQV---MRDTSD 629

Query: 947 GFTLATHDLEIRGAGELLGEEQSGQI 972
           GF +A  DLE+RG GE+LG  Q+GQ+
Sbjct: 630 GFRIAEKDLELRGPGEVLGTRQTGQL 655