Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., ATP-dependent DNA helicase RecG from Xanthobacter sp. DMC5

 Score =  221 bits (562), Expect = 2e-61
 Identities = 138/377 (36%), Positives = 205/377 (54%), Gaps = 15/377 (3%)

Query: 603 PFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVP 662
           PF  T  Q  AI ++ +D+     M RL+ GDVG GKT VA+ AA    + G+Q A++ P
Sbjct: 267 PFRLTGAQDQAIASIRADLAADTRMLRLLQGDVGSGKTVVALMAAATVAEAGRQTALMAP 326

Query: 663 TTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSE 722
           T +LA+QH E      A   +   +L+  +  + ++ +L + A G+ D+++GTH L+  +
Sbjct: 327 TEILARQHLETIAPLAAAAGLSTAILTGREKGRAREAVLAEQASGRTDLVIGTHALIQDD 386

Query: 723 IRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIA 782
           + F DL L +VDE+HRFGV Q+  +      VD+L +TATPIPRTL + + G  D S + 
Sbjct: 387 VVFHDLALAVVDEQHRFGVEQRLTLARKGEAVDMLVMTATPIPRTLVLTLFGDMDSSELR 446

Query: 783 TPPARRLAIKTFVRQSE--DSVIREAVLREIMRGGQVYFLHNQVETID--KVAADLEKL- 837
             P  R AI T     +  D V+   V R +  G + Y++   VE  D   +A   E+  
Sbjct: 447 EKPPGRQAIDTRALPLDRLDEVV-AGVGRALASGARAYWICPLVEETDTSDLAPATERYE 505

Query: 838 ----VPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDRA 893
               +  A + + HG+M     ++ M  F      LLV TT+IE G++VP A  ++++ A
Sbjct: 506 TLQSIFGASVGLVHGRMSGAAKDEAMGRFARGETRLLVATTVIEVGVNVPEATVMVIEHA 565

Query: 894 DSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTLATH 953
           +  GLAQLHQLRGRVGR    +   LL   P  + + A  RL  +   +D   GF LA  
Sbjct: 566 ERFGLAQLHQLRGRVGRGDKPSVCLLLYRHP--LGETAKSRLAILRESQD---GFRLAEE 620

Query: 954 DLEIRGAGELLGEEQSG 970
           DL +RG G++LG  QSG
Sbjct: 621 DLRLRGEGDVLGTRQSG 637