Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., ATP-dependent DNA helicase RecG (EC 3.6.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  217 bits (553), Expect = 2e-60
 Identities = 143/391 (36%), Positives = 211/391 (53%), Gaps = 26/391 (6%)

Query: 603 PFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVP 662
           PF  T  Q      +  D+ +   M RL+ GDVG GKT VA  AA +A D G Q A++ P
Sbjct: 260 PFALTGAQRRVGEEIARDLLRQVPMHRLLQGDVGSGKTVVAALAAAIAIDAGWQCALMAP 319

Query: 663 TTLLAQQHFENF----RDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKL 718
           T +LA+QHF           A L  RV  L+  +  K++ ++L  +A G+  ++VGTH +
Sbjct: 320 TEILAEQHFAKLIGWLEPLLAPLGKRVAWLTGSQKKKQRGEMLVLIASGEAALVVGTHAV 379

Query: 719 LSSEIRFADLGLLIVDEEHRFGVRQKEKVKAM--------RADVDILTLTATPIPRTLNM 770
           +  ++ F  L L I+DE+HRFGV Q+  +++           +  +L +TATPIPRTL M
Sbjct: 380 IQDQVVFKHLALAIIDEQHRFGVAQRLALRSKVGVAADGTEQEPHLLMMTATPIPRTLAM 439

Query: 771 AMSGMRDLSII-ATPPARRLAIKTFVRQSEDSVIREAVLREIMRGGQVYF---LHNQVET 826
           +     D+S I   PP R   +   V  S  + + E +  ++ +G QVY+   L  + E 
Sbjct: 440 SYYADLDVSTIDELPPGRTPIVTKVVADSRRAEVIERIRGQLAQGRQVYWVCPLIEESEA 499

Query: 827 ID-----KVAADLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGID 881
           ID        A+L   +P   + + H +M   E + VM+ F   +  +LV TT+IE G+D
Sbjct: 500 IDLSNATATHAELSASLPGVLVGLLHSRMPVAEKKAVMSLFTGGQMGVLVSTTVIEVGVD 559

Query: 882 VPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKA--ITKDAVKRLEAIA 939
           VP A+ ++++ A+  GL+QLHQLRGRVGR    +   L+  PP    + + A +RL A+A
Sbjct: 560 VPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLMYTPPDGGRLGETARERLRAMA 619

Query: 940 SLEDLGAGFTLATHDLEIRGAGELLGEEQSG 970
              D   GF +A  DLEIRG GE LG  QSG
Sbjct: 620 DTSD---GFEIARRDLEIRGPGEFLGARQSG 647