Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., ATP-dependent DNA helicase RecG from Magnetospirillum magneticum AMB-1

 Score =  231 bits (588), Expect = 2e-64
 Identities = 146/399 (36%), Positives = 221/399 (55%), Gaps = 17/399 (4%)

Query: 600 ATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAV 659
           A  P+  T  Q+ ++  + +DM Q   M RL+ GDVG GKT VA+ A   A + G Q A+
Sbjct: 260 AALPYTLTGAQSRSLAEIDADMAQPLRMLRLLQGDVGSGKTVVALLAMLTAVEAGCQAAM 319

Query: 660 LVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLL 719
           + PT +LA+QH+           ++V +L+     K +  +L  +A G+  I++GTH L 
Sbjct: 320 MAPTEILARQHYAGIAPLAEAAGLKVALLTGRDKGKARDAVLAGLASGETHIMLGTHALF 379

Query: 720 SSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLS 779
             ++ F DL L ++DE+HRFGV Q+ ++ A    VD+L +TATPIPRTL +   G  D S
Sbjct: 380 QEDVAFKDLALAVIDEQHRFGVHQRLELAAKGLAVDMLVMTATPIPRTLLLTAYGDMDAS 439

Query: 780 -IIATPPARRLAIKTFVRQSEDSVIREAVLREIMRGGQVYF---LHNQVETIDKVAAD-- 833
            +   PP R+      V  +    +   V R I  G + Y+   L  + ET D  AA+  
Sbjct: 440 RLDEKPPGRKPIDTRVVPLARLDEMVAGVGRAISGGARAYWVCPLVEESETSDLAAAEER 499

Query: 834 ---LEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIM 890
              L ++  + R+ + HG+M+    +KVM +F     ++LV TT+IE G+DVP AN +++
Sbjct: 500 HRHLSQVFGD-RVGLVHGRMKGAAKDKVMAEFAAGELDILVATTVIEVGVDVPAANIMVI 558

Query: 891 DRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTL 950
           + A+  GLAQLHQLRGRVGR   ++   LL   P  + + A  RLE + + ED   GF +
Sbjct: 559 EHAERFGLAQLHQLRGRVGRGTRESRCLLLYGHP--LGEIAKARLEIMRATED---GFRI 613

Query: 951 ATHDLEIRGAGELLGEEQSG--QIQSVGFTLYMEMLEQA 987
           A  DL +RG GE+LG  QSG  + +     ++ E+L  A
Sbjct: 614 AEEDLRLRGGGEMLGTRQSGLPEFRLADLAIHGELLAAA 652