Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., ATP-dependent DNA helicase RecG (EC 3.6.1.-) from Kangiella aquimarina DSM 16071

 Score =  235 bits (600), Expect = 8e-66
 Identities = 153/426 (35%), Positives = 241/426 (56%), Gaps = 28/426 (6%)

Query: 603  PFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVP 662
            PF+ T  Q   I  ++ D+ Q   M RL+ GDVG GKT VA +AA  A + G QVAV+ P
Sbjct: 274  PFKPTAAQKRVIQEIIHDLEQPHPMLRLLQGDVGAGKTLVAAQAALQAIEAGFQVAVMAP 333

Query: 663  TTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSE 722
            T LLA QH+++F   F  + I    L+   +A ++K  L+ +A G+  ++VGTH L    
Sbjct: 334  TELLADQHYQSFSQWFEAMNIPCVFLASKLNASQRKAALEVIASGEAKLIVGTHALFQKG 393

Query: 723  IRFADLGLLIVDEEHRFGVRQKEKVKAMRAD---VDILTLTATPIPRTLNMAMSGMRDLS 779
            + + +LGL I+DE+HRFGV Q+  +K    +   +  L +TATPIPRTL M +    D+S
Sbjct: 394  VEYHNLGLAIIDEQHRFGVNQRLMLKQKAPEGMQLHQLMMTATPIPRTLAMTVYADMDVS 453

Query: 780  IIATPPARRLAIKTFV--RQSEDSVIR--EAVLREIMRGGQVYF---LHNQVETIDKVAA 832
            II   P  R  ++T     Q  + VI+  E   R+  R  QVY+   L ++ E I   AA
Sbjct: 454  IIDELPPGRTPVQTVALSDQKREQVIKRIETACRDENR--QVYWVCTLIDESEEIQCQAA 511

Query: 833  D-----LEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANT 887
            +     L + +P  R+ + HG+++  + + VM+ F     ++LV TT+IE G+DVP A+ 
Sbjct: 512  ESAANLLTQQLPACRVGLLHGRLKPEQKQMVMDKFKQGELDILVATTVIEVGVDVPNASL 571

Query: 888  IIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAG 947
            ++++  + LGL+QLHQLRGRVGR   +++  LL   P  ++ +A  R++ +    D   G
Sbjct: 572  MVIENPERLGLSQLHQLRGRVGRGSVESHCVLLYQHP--LSDNAKARIQVMRETND---G 626

Query: 948  FTLATHDLEIRGAGELLGEEQSGQIQSVGFTLYMEMLEQAVEALKSGKEPALDDLLREQT 1007
            F +A  DL +RG GE+LG  Q+G++     +L    L +  E + + ++ A  DL+ E  
Sbjct: 627  FVIAEEDLRLRGPGEMLGTRQTGEV-----SLRFADLVRDAELIPAIQQQA-HDLIAENN 680

Query: 1008 EVEMRL 1013
            E+  ++
Sbjct: 681  ELAHKI 686