Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 689 a.a., ATP-dependent DNA helicase RecG from Fusobacterium nucleatum SB010

 Score =  266 bits (679), Expect = 5e-75
 Identities = 141/389 (36%), Positives = 237/389 (60%), Gaps = 16/389 (4%)

Query: 592 REQYATFKATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVAT 651
           +E+   F +   F  T+ Q   I  +  ++   K ++RL+ GDVG GKT VAM       
Sbjct: 253 KEKVKNFLSQLTFNLTNAQKKVIKEIYDEISNGKIVNRLIQGDVGSGKTVVAMVMLIYMA 312

Query: 652 DNGKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDI 711
           +NG Q A++ PT +LA QH+   ++R   + +RVE+L+     K++ +IL+ +A+G +DI
Sbjct: 313 ENGYQGALMAPTEILANQHYLGIKERLEKIGLRVELLTSSIKGKKKNEILEGIANGDIDI 372

Query: 712 LVGTHKLLSSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMA 771
           ++GTH L+   + F  LGL+++DE+HRFGV Q+ K++      ++L ++ATPIPR+L ++
Sbjct: 373 VIGTHSLIEDNVVFKKLGLIVIDEQHRFGVNQRNKLREKGFLGNLLVMSATPIPRSLALS 432

Query: 772 MSGMRDLSIIATPPARRLAIKT-FVRQSED-SVIREAVLREIMRGGQVYFLHNQVET--- 826
           + G  DLSII   P  R  IKT ++   ED   + + + +++  G Q YF+   +ET   
Sbjct: 433 IYGDLDLSIIDELPPGRTPIKTKWIANDEDLEKMYDFIYKKVNAGNQAYFVAPLIETSDK 492

Query: 827 -----IDKVAADLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGID 881
                +DKV+ ++E+     +I + HG+M+ +E ++VM  F ++ +++L+ TT+IE GID
Sbjct: 493 MALKSVDKVSEEIERKFSNKKIGIIHGKMKAKEKDEVMLKFKNKEYDILIATTVIEVGID 552

Query: 882 VPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASL 941
           VP +  + +  A+  GL+ LHQLRGRVGR   Q+Y +L++    +IT+++ +RL  +   
Sbjct: 553 VPASTIMTIYNAERFGLSALHQLRGRVGRGSKQSYCFLIS---NSITENSKQRLSIMEET 609

Query: 942 EDLGAGFTLATHDLEIRGAGELLGEEQSG 970
           ED   GF +A  DL++R +GE+ G  QSG
Sbjct: 610 ED---GFRIAEEDLKLRNSGEIFGLRQSG 635