Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., ATP-dependent DNA helicase RecG (EC 3.6.1.-) from Enterobacter asburiae PDN3

 Score =  237 bits (604), Expect = 3e-66
 Identities = 157/391 (40%), Positives = 214/391 (54%), Gaps = 25/391 (6%)

Query: 600 ATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAV 659
           A+ PF+ T  QA     +  DM     M RLV GDVG GKT VA  AA  A  NGKQVA+
Sbjct: 263 ASLPFKPTGAQARVTAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIANGKQVAL 322

Query: 660 LVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLL 719
           + PT LLA+QH  NFR  FA L I V  L+  +  K +    + +A G+V ++VGTH + 
Sbjct: 323 MAPTELLAEQHANNFRAWFAPLGIEVGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIF 382

Query: 720 SSEIRFADLGLLIVDEEHRFGVRQK----EKVKAMRADVDILTLTATPIPRTLNMAMSGM 775
             +++F  L L+I+DE+HRFGV Q+    EK          L +TATPIPRTL M     
Sbjct: 383 QEQVQFNGLALVIIDEQHRFGVHQRLALWEKGLQQGFHPHQLIMTATPIPRTLAMTAYAD 442

Query: 776 RDLSII-ATPPAR----RLAIKTFVRQSEDSVIREAVLREIMRGGQVYFLHNQVETIDKV 830
            D S I   PP R     +AI    R      +R A  +E   G Q Y++   +E  + +
Sbjct: 443 LDTSTIDELPPGRTPVTTVAIPDTRRSDIIDRVRNACTQE---GRQAYWVCTLIEESELL 499

Query: 831 AA--------DLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDV 882
            A        +L+  +PE  + + HG+M+  E + VM  F     +LL+ TT+IE G+DV
Sbjct: 500 EAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMQSFKQGDLHLLIATTVIEVGVDV 559

Query: 883 PTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLE 942
           P ++ +I++  + LGLAQLHQLRGRVGR    ++  LL   P  ++K A  RL+    L 
Sbjct: 560 PNSSLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKAP--LSKTAQMRLQV---LR 614

Query: 943 DLGAGFTLATHDLEIRGAGELLGEEQSGQIQ 973
           D   GF +A  DLEIRG GELLG  Q+G  +
Sbjct: 615 DSNDGFVIAQKDLEIRGPGELLGTRQTGNAE 645