Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., ATP-dependent DNA helicase RecG from Dickeya dadantii 3937

 Score =  239 bits (609), Expect = 7e-67
 Identities = 151/385 (39%), Positives = 213/385 (55%), Gaps = 19/385 (4%)

Query: 600 ATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAV 659
           A  PF  T  Q   +  +  DM +   M RLV GDVG GKT VA  AA  A  +GKQVA+
Sbjct: 263 AALPFSPTGAQQRVVAEIEQDMNKPFPMMRLVQGDVGSGKTLVAALAALQAIAHGKQVAL 322

Query: 660 LVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLL 719
           + PT LLA+QH  NFR  F  L + V  L+  +  K ++   + +A G+V ++VGTH + 
Sbjct: 323 MAPTELLAEQHAANFRRWFEPLGVEVGWLAGKQKGKARQAQQEAIASGQVSMVVGTHAIF 382

Query: 720 SSEIRFADLGLLIVDEEHRFGVRQK----EKVKAMRADVDILTLTATPIPRTLNMAMSGM 775
             +++F  L L+I+DE+HRFGV Q+    EK +        L +TATPIPRTL M     
Sbjct: 383 QQQVQFNGLALVIIDEQHRFGVHQRLALWEKGEEQGFHPHQLIMTATPIPRTLAMTAYAD 442

Query: 776 RDLSIIATPPARRLAIKTFV--RQSEDSVIREAVLREIMRGGQVYFLHNQVETIDKVAA- 832
            D S+I   P  R  + T        D +I+      +  G Q Y++   +E  + + A 
Sbjct: 443 LDTSVIDELPPGRTPVTTVAIPDTRRDDIIQRVRNACLQEGRQAYWVCTLIEESELLEAQ 502

Query: 833 -------DLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTA 885
                  +L+  +P+  I + HG+M+ +E + VM  F   + +LLV TT+IE G+DVP A
Sbjct: 503 AAEATCQELKAALPDLTIGLVHGRMKAQEKQAVMAAFKTNQLHLLVATTVIEVGVDVPNA 562

Query: 886 NTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLG 945
           + +I++  + LGLAQLHQLRGRVGR    ++  LL   P  ++K A  RL+    L D  
Sbjct: 563 SLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSP--LSKTAQMRLQV---LRDSN 617

Query: 946 AGFTLATHDLEIRGAGELLGEEQSG 970
            GF +A  DLEIRG GELLG  Q+G
Sbjct: 618 DGFVIAQRDLEIRGPGELLGTRQTG 642