Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., ATP-dependent DNA helicase RecG from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  220 bits (561), Expect = 3e-61
 Identities = 138/382 (36%), Positives = 208/382 (54%), Gaps = 18/382 (4%)

Query: 603 PFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVP 662
           PF+ T+ QA AI  +  D+   + M RL+ GDVG GKT VA  A   A  +  Q  ++ P
Sbjct: 260 PFQLTNAQAQAIAEIRRDLASGQQMGRLLQGDVGSGKTAVAALALADAAASSFQSTLMAP 319

Query: 663 TTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSE 722
           T +LA+QH+E          +   +L+   +  ++++ L D+A G   + +GTH L    
Sbjct: 320 TEILARQHYEKLGPILDAAGVAAVLLTGRDTPAQRREKLADLASGHAQVAIGTHALFQDA 379

Query: 723 IRFADLGLLIVDEEHRFGVRQKEKVKA----MRADVDILTLTATPIPRTLNMAMSGMRDL 778
           +RF  L L ++DE+HRFGV ++++++A        V +LT++ATPIPRTL +   G  ++
Sbjct: 380 VRFDRLALAVIDEQHRFGVNERQRLQAKGDPRLGAVHLLTMSATPIPRTLELTQYGELEV 439

Query: 779 S-IIATPPARRLAIKTFVRQSEDSVIREAVLREIMRGGQVYF---LHNQVETIDKVAA-- 832
           S ++  PP R       +  +    +   +   +  G Q Y+   L  + E ID  AA  
Sbjct: 440 SRLMEKPPGRTPVTTAVLPLARIGEVAARLKTAVESGAQAYWICPLVEESEAIDLAAAVD 499

Query: 833 ---DLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTII 889
              DL +L+    + +AHGQM   E E VM DF   R  +LV TT++E G+DVP A+ ++
Sbjct: 500 RADDLRRLL-GVEVGLAHGQMPGAEREAVMADFADGRLPVLVATTVVEVGVDVPNASIMV 558

Query: 890 MDRADSLGLAQLHQLRGRVGRSHHQAYAYLL-TPPPKAITKDAVKRLEAIASLEDLGAGF 948
           ++ AD  GLAQLHQLRGRVGR    +   LL      A+ + A +RLE +   ED   GF
Sbjct: 559 IEHADRFGLAQLHQLRGRVGRGSKASSCILLYGGQDGALGETAKERLETLRRTED---GF 615

Query: 949 TLATHDLEIRGAGELLGEEQSG 970
            +A  D  +RG G+ LG +QSG
Sbjct: 616 EIAEEDFRLRGGGDPLGLKQSG 637