Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., ATP-dependent DNA helicase RecG from Azospirillum sp. SherDot2

 Score =  238 bits (608), Expect = 1e-66
 Identities = 140/379 (36%), Positives = 212/379 (55%), Gaps = 13/379 (3%)

Query: 600 ATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAV 659
           A  PF  T  QA ++  + +DM   + M RL+ GDVG GKT VA+ A   A + G Q A+
Sbjct: 282 AALPFSLTGSQAGSLEEIYADMAAERRMLRLLQGDVGSGKTVVALMAMLNAVETGAQAAL 341

Query: 660 LVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLL 719
           + PT +LA+QH E+         + + +L+     K ++ +L  +A G++ +LVGTH L 
Sbjct: 342 MAPTEILARQHAESLAPLCRAAGVEIGLLTGRDKGKARQAVLDRLASGELPLLVGTHALF 401

Query: 720 SSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLS 779
             ++ F DL L ++DE+HRFGV Q+ ++ A    VD+L +TATPIPRTL +   G  D+S
Sbjct: 402 QEDVAFKDLALAVIDEQHRFGVHQRLQLSAKGRAVDVLVMTATPIPRTLTLTAYGDMDVS 461

Query: 780 IIATPPARRLAIKTF-VRQSEDSVIREAVLREIMRGGQVYF---LHNQVETIDKVAADLE 835
            +   PA R  ++T  +       +   + R++  G +VY+   L ++ E  D  AA   
Sbjct: 462 RLTEKPAGRKPVQTVTIALDRLEEVVNGIQRKVTEGARVYWVCPLVDESEQSDLAAATER 521

Query: 836 KLVPEA----RITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMD 891
                A    R+ + HG+MR  + + VM  F     ++LV TT+IE G++VP A  ++++
Sbjct: 522 HAFLRATFGDRVGLVHGKMRGPDKDAVMAAFAEGSLDVLVATTVIEVGVNVPEATVMVIE 581

Query: 892 RADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTLA 951
            A+  GLAQLHQLRGRVGR    +   L+      +T+ A  RL+ +   ED   GF +A
Sbjct: 582 HAERFGLAQLHQLRGRVGRGEKPSSCLLMF--ESNLTETARARLKTLRDTED---GFVIA 636

Query: 952 THDLEIRGAGELLGEEQSG 970
             DL +RGAGE+LG  QSG
Sbjct: 637 EEDLRLRGAGEVLGTRQSG 655