Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Lipoprotein releasing system transmembrane protein LolC/LolE from Variovorax sp. SCN45

 Score =  228 bits (580), Expect = 3e-64
 Identities = 164/427 (38%), Positives = 241/427 (56%), Gaps = 34/427 (7%)

Query: 5   MFHPISAFIGLRYLR-GRSGDR--FSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKS 61
           M  P    +G RY R GR+  R  F  F+S +S  GI +GV +L+ VLSVMNGF+ +++ 
Sbjct: 1   MRFPYELQLGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60

Query: 62  RILGVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPE-----PLVRSDAVVQSASQLAA 116
           R+LGV+    +    G+    A P       + ++ PE     P + + A++     +  
Sbjct: 61  RMLGVVSHIEIFSRDGQ----ALPQLEEIMAAARKHPEVIGAAPFINTQALIARGEDMKG 116

Query: 117 GLLIGIEPQQNDPI-EQHLIA--GRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTE 173
            ++ GI+P+    + + + IA  G    L  GE+ + LG  LARSL V  GDKV L V  
Sbjct: 117 TVVRGIDPKLEPEVTDTNSIAAHGTFDKLVPGEFGIVLGAELARSLFVQPGDKVTL-VAP 175

Query: 174 ASQFTPLGRLPSQRNFTVAGIFNTGS-DVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFD 232
             Q TP G +P  + FTV G F++G  + D  L + H +DAAK+ R +  T  G RL   
Sbjct: 176 GGQVTPAGVVPRLKQFTVVGTFDSGHYEYDSALAMVHEQDAAKVFRLEGPT--GIRLKLK 233

Query: 233 DPFVVSQLAEQ---PLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIIS 289
           D      +A+Q    LP ++   DW  Q    F AV++EK MM ++L LIV VAAFN++S
Sbjct: 234 DLNEARDVADQLAVSLPGEFLIRDWTRQNKTWFAAVQVEKRMMFIILTLIVAVAAFNLVS 293

Query: 290 ALIMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLM 349
            L+M V +K+A++AIL+T G   + ++ IF+VQGA  GVIG + G LLG+ +A N++ ++
Sbjct: 294 TLVMTVTDKRADIAILRTLGSSPRSIMGIFVVQGAMVGVIGTVAGLLLGLGIAFNIDVIV 353

Query: 350 EALGVALFSVGGSLPVAI--------DPLQ--IVLVIVLAIVLSLLATLFPAYRASSVQP 399
             L   LF     LP  I        DP Q  IV + ++++VLS +ATL+P++RAS V P
Sbjct: 354 PFL-EHLFH-ASFLPKDIYLISKMPSDPQQSDIVPIAIISLVLSFVATLYPSWRASRVNP 411

Query: 400 AEALRYE 406
           AEALRYE
Sbjct: 412 AEALRYE 418