Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Lipoprotein releasing system transmembrane protein LolC/LolE from Sphingobium sp. HT1-2

 Score =  183 bits (464), Expect = 9e-51
 Identities = 130/419 (31%), Positives = 219/419 (52%), Gaps = 37/419 (8%)

Query: 13  IGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLPQAVV 72
           I  RYL    G+ F   V+ +S A + +GV +L+ V+SVMNGF A+L  +I+G+   AVV
Sbjct: 10  IAKRYLLPGKGEGFIFLVAGISLAAVMLGVAALIIVMSVMNGFRAELFDKIVGLNGHAVV 69

Query: 73  TEAAGKTTLSATPPDFVTALSTQRPPE------PLVRSDAVVQSASQLAAGLLIGI---E 123
               G+       PD+   L   +         PL+    +     ++   L+ G+   +
Sbjct: 70  QGYGGRL------PDWRDVLKEAKATPGVTSATPLIEQPLLGSYQGRVEGVLVRGMTVPD 123

Query: 124 PQQNDPIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRL 183
            + N  ++  ++AG + AL A   ++ +G  LA +L + VGD + +M   A + TP G +
Sbjct: 124 IRSNTTLKGKIVAGDLNALTANSEKVGIGVRLAENLGIQVGDHISIM-NPAGRSTPFGTV 182

Query: 184 PSQRNFTVAGIFNTGS-DVDGQLMVTHLRDAAKLL-------RYDAQTISGWRLFFDDPF 235
           P Q ++ VA IF  G  D D   +V  + DA  LL         + +T++  R+      
Sbjct: 183 PRQISYQVAAIFEVGVYDYDKAFVVMPIEDAQTLLLLGDVVSMIEVETVNADRVGSILEP 242

Query: 236 VVSQLAEQPLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVV 295
           + +++A + + QDW     R+    LF+A+ +E+  M ++L +IV VA FNI+S+LIM+V
Sbjct: 243 LAAKVAGRAVVQDW-----RQMNASLFEALAVERVAMFVVLSIIVLVAVFNILSSLIMLV 297

Query: 296 MEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLL----AANLNSLMEA 351
             K  ++AIL+T G     ++ IFM  G + G +G + G +LG        + +N +   
Sbjct: 298 RAKTRDIAILRTMGASRSGLVKIFMTVGVTIGTLGMVAGMVLGFTFLFFRQSVVNVIQFV 357

Query: 352 LGVALFSVG----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
            G  L+         LP   DP++IV++ ++A+V S LATL+PA++A++  P + LRYE
Sbjct: 358 TGQNLWDPSIRFLTELPSKPDPVEIVIICLMALVFSFLATLYPAFKAANTDPVQVLRYE 416