Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., Lipoprotein releasing system, permease protein from Pseudomonas putida KT2440

 Score =  255 bits (652), Expect = 1e-72
 Identities = 151/420 (35%), Positives = 236/420 (56%), Gaps = 30/420 (7%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           MF P+  FIG RY R +  + F  F+S  S  G+++GV++++ VLSVMNGF+ ++ SRIL
Sbjct: 1   MFRPLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAA--GLLIGI 122
           G++P A +        L   P D    ++      P V + A +     + +  G +  I
Sbjct: 61  GLVPHAAI--------LGVQPVDDWHKVADAAMKNPAVMAVAPITEMEGMLSYKGAMQPI 112

Query: 123 EPQQNDPIE--------QHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEA 174
           +    DP E        QH++ GR+  LQ GE+ + +G L AR   +  GDK+ L+V E 
Sbjct: 113 QVGGIDPAEEGKVSIVGQHIVQGRLQGLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEI 172

Query: 175 SQFTPLGRLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDP 234
           S+  P G  P  +  TV GIF  G+++DG     H+ DAA++ R+    + G RL   D 
Sbjct: 173 SK-EPGGITPRMQRLTVVGIFKVGAELDGSQAYIHVADAAEMQRWAPGQVQGVRLKLHDL 231

Query: 235 FVVSQLAEQ---PLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISAL 291
           +   Q+++     L   ++  DW   +G LF A++MEK M+GL+L +I+ VAAFNII+ L
Sbjct: 232 YAAPQVSKAIAAGLGDAYRADDWSHTQGSLFSAMKMEKTMIGLLLMMIIAVAAFNIIATL 291

Query: 292 IMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEA 351
           +MVV +K  ++AIL+T G     ++  FMVQG+  G++G L+GG+LGV+ A N++ ++  
Sbjct: 292 VMVVNDKGPDIAILRTLGATPAQIMGTFMVQGSLIGIVGTLIGGVLGVIAAFNVSQIVGW 351

Query: 352 L----GVALFSVG----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEAL 403
           L    G  +F+       SLP  +    + ++    +V+S LAT++PAYRAS VQPA  L
Sbjct: 352 LERVSGQHIFTSDVYFVSSLPSQLQWGDVAIICTAGLVMSFLATIYPAYRASQVQPAIGL 411