Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., lipoprotein-releasing ABC transporter permease subunit from Pseudomonas segetis P6

 Score =  269 bits (687), Expect = 1e-76
 Identities = 159/423 (37%), Positives = 242/423 (57%), Gaps = 30/423 (7%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           MF P+S F+G RY R +  + F  F+S  S  G+ +GV++++ VLSVMNGF+ ++ SRIL
Sbjct: 1   MFRPLSIFVGARYTRAKRRNHFISFISLTSMIGLALGVLAMIVVLSVMNGFQKEMSSRIL 60

Query: 65  GVLPQAVVTEAAGKTTLSATPPDF--VTALSTQRPPE-----PLVRSDAVVQSASQLAAG 117
           G++P A ++        + TP D     A + Q+ PE     P    + ++     +   
Sbjct: 61  GMVPHASIS--------AVTPLDDWKTVADAAQKNPEVIAAVPFAELEGMLSFRGAMQPI 112

Query: 118 LLIGIEPQQNDPIE---QHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEA 174
            L GI+PQ    +     H++ GR+  L+ GEY + +G + AR   + +GDK+ L+V E 
Sbjct: 113 QLQGIDPQLEPKVSIIGDHMVKGRLADLKPGEYGVVIGEITARRFRLNIGDKLALIVPEV 172

Query: 175 SQFTPLGRLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDP 234
           S   P G  P  +   V GIF  G+++D  L + ++ DAA + RY    +   RL   D 
Sbjct: 173 SS-VPGGITPRMKRLNVVGIFKVGAELDSSLALINVADAADIQRYKPGQVQSVRLKVKDL 231

Query: 235 FVVSQLAEQ---PLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISAL 291
           +   Q++ Q    L  D++ SDW   +G LF A++MEK M+GL+L LIV VAAFNII+ L
Sbjct: 232 YAAPQVSAQVAASLGADYRASDWTLTQGSLFSAMKMEKTMIGLLLLLIVAVAAFNIIATL 291

Query: 292 IMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLM-- 349
           IMVV +K A++AIL+T G   + ++ IF+VQG   G +G L+G  LG++ A N++ L+  
Sbjct: 292 IMVVADKGADIAILRTIGATPRQIMGIFIVQGTVIGTVGTLIGCALGIVAALNVSQLVGW 351

Query: 350 --EALGVALFSVG----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEAL 403
                G  +FS       +LP  +    ++L+   A  LS LATL+P++RAS +QPAEAL
Sbjct: 352 IERVSGQHVFSSDVYFISNLPSQLQLTDVLLICAAAFGLSFLATLYPSWRASRIQPAEAL 411

Query: 404 RYE 406
           RYE
Sbjct: 412 RYE 414