Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., ABC transporter permease from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  108 bits (269), Expect = 4e-28
 Identities = 101/406 (24%), Positives = 190/406 (46%), Gaps = 24/406 (5%)

Query: 13  IGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLPQAVV 72
           I  RY   R        +S ++  G+ +G  +L+ VLSV NG E  ++       P   V
Sbjct: 7   IAKRYFFSRKKRNIISIISNIAMIGVAVGSAALIIVLSVFNGLEDLIRELYSSFDPDLKV 66

Query: 73  TEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSA-----SQLAAGLLIGIEPQ-- 125
           T A GK+    T  +F+  +  +  P   V S+ +  +A      +     + G+     
Sbjct: 67  TAAEGKSF--ETDTEFMNRI--RHTPGVAVVSEVIEDNALLRYNDRQMVVKMKGVSENFF 122

Query: 126 QNDPIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDK---VRLMVTEASQFTPLGR 182
           + + I+  ++ G         Y+  +G  +   L++   ++   ++ +     +F PL  
Sbjct: 123 EQNEIDSAVVEGSSDLYMKNAYRALVGRGVQYQLSIHPSNQFVPLQFLYPRNVKFNPLNP 182

Query: 183 LPSQRNFTV--AGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQL 240
             S  N  +   GIF      D   +   L  A +LL Y  +  +   L  +  F V Q+
Sbjct: 183 EGSFNNLNILPGGIFAIERQYDDAYVFVPLNFAEELLEYGRRR-TALELKVERGFKVEQV 241

Query: 241 A---EQPLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVME 297
               +Q L + ++  +  EQ   L +AV++EK  + +    I+G+A+ NI  +L M+V++
Sbjct: 242 KKALQQMLGEGFKVQNSDEQHTSLLRAVKVEKLFVFITFAFILGIASLNIFFSLSMLVID 301

Query: 298 KQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSL--MEALGVA 355
           K+ ++AIL + G  ++ +  IF+++GA    IGA  G  LG+L+  NL     + ++G+A
Sbjct: 302 KKKDIAILASMGATAKTIRNIFLLEGALVACIGAAYGLTLGMLI-CNLQQTFGLVSMGMA 360

Query: 356 LFSVGGSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAE 401
             SV  + PV ++    VL  +  I+++LL ++ PA +A+++   E
Sbjct: 361 T-SVVEAYPVKMEIEDFVLTGLAIIIITLLVSIRPANKAAALSVTE 405