Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., outer membrane-specific lipoprotein transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  176 bits (445), Expect = 1e-48
 Identities = 127/413 (30%), Positives = 208/413 (50%), Gaps = 16/413 (3%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           M  P+S  IGLR+ RGR        +S +ST GI +GV  L+  LS MNGFE +L +RIL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 124
            V+P   +       T      D V  +       P +    +V+S + L A  + G+ P
Sbjct: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 125 QQNDPIEQ--HLIAGRVTA-LQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
           QQ   +      + G      +AGE Q+ +G  +A +L V  GD V +M+  ++    L 
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
           + P +    VAGI      +D    +  L DA + L   + ++SG  L   D F  ++L 
Sbjct: 181 Q-PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGS-SVSGIALKMTDVFNANKLV 238

Query: 242 EQP--LPQDWQW-SDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEK 298
                +   + +   W    G +++ ++M + +M L + L++GVA FNI+S L+M V +K
Sbjct: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298

Query: 299 QAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLME----ALGV 354
             ++A+L+T G +   + AIF+  G  +G+ G+L G ++GV+++  L  ++E     +G 
Sbjct: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358

Query: 355 ALFSVG----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEAL 403
              S        LP  +  L +  V+V A++LSLLA+ +PA RAS++ PA  L
Sbjct: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411