Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., outer membrane-specific lipoprotein transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  434 bits (1115), Expect = e-126
 Identities = 213/402 (52%), Positives = 301/402 (74%), Gaps = 3/402 (0%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           M+ P++ FIGLRY+RGR+ DRF RFVS++ST GIT+GVM+LVTVLSVMNGFE +L++ IL
Sbjct: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60

Query: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 124
           G++PQA+++   G       P   V      R   P+   D V+QSA  +A G+++GI+P
Sbjct: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA-PITTGDVVLQSARSVAVGVMLGIDP 119

Query: 125 QQNDPIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLP 184
            Q DP+  +L+  + T L+ G+Y + LG  LA  L V  GD++R+MV  ASQFTP+GR+P
Sbjct: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179

Query: 185 SQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLAEQP 244
           SQR F V G F   S+VDG  M+ ++ DA++L+RY A  I+GWRL+ D+P  V  L++Q 
Sbjct: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239

Query: 245 LPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQAEVAI 304
           LP+  +W DWR+++GELFQAVRMEKNMMGL+L LIV VAAFNII++L ++VMEKQ EVAI
Sbjct: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299

Query: 305 LKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVALFSVGGSLP 364
           L+TQG+  + ++ +FMVQGAS+G+IGA++G  LG LLA+ LN+LM  +GV L   G +LP
Sbjct: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLL--DGAALP 357

Query: 365 VAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
           VAI+PLQ++++ ++A+ ++LL+TL+P++RA++ QPAEALRYE
Sbjct: 358 VAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399