Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., lipoprotein-releasing ABC transporter permease subunit LolC from Erwinia tracheiphila SCR3

 Score =  419 bits (1078), Expect = e-122
 Identities = 213/402 (52%), Positives = 293/402 (72%), Gaps = 3/402 (0%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           M+ P++ FIGLRY+RGR+ DRF RFVS++S  GIT+GV++LVTVLSVMNGFE +L+   L
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVLALVTVLSVMNGFEHELEKSTL 60

Query: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 124
            ++PQA+VT   G       P   +      R   PL  +D V+QSA  +  G+++GI P
Sbjct: 61  NLMPQALVTSDKGSVNPQQVPASSLQLRGVNRLT-PLTTADVVLQSAHSVGVGVMLGIMP 119

Query: 125 QQNDPIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLP 184
            + DP+  +L       LQ+G+Y + LG  LA+ L V  GD++RLMV  ASQFTP+GRLP
Sbjct: 120 DEPDPLGPYLSNVSQQTLQSGQYNVILGEQLAQQLGVKRGDELRLMVPSASQFTPMGRLP 179

Query: 185 SQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLAEQP 244
           SQR FTVAG F   S+VDG  ++ + +DA++L+RY A  I+GWRL+ D P  V  L+EQ 
Sbjct: 180 SQRLFTVAGTFAANSEVDGYQILVNQQDASRLMRYPAGNITGWRLWLDKPLQVDALSEQK 239

Query: 245 LPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQAEVAI 304
           LPQ   W DWRE++GELFQAVRMEKNMMGL+L LIV VAAFNII++L +++MEKQ EVAI
Sbjct: 240 LPQGLVWKDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLLIMEKQGEVAI 299

Query: 305 LKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVALFSVGGSLP 364
           L+TQG+  + ++ +FMVQGA++G++G+++G LLGVLLA+ LN+LM  +G  L   G +LP
Sbjct: 300 LQTQGLTRRQIVLVFMVQGATAGIVGSVLGALLGVLLASQLNNLMPLIGTLL--DGAALP 357

Query: 365 VAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
           V I   Q++ +++ A+VLSLL+TL+P++RA++VQPAEALRYE
Sbjct: 358 VDISVPQVLTIVITAMVLSLLSTLYPSWRAAAVQPAEALRYE 399