Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., ABC transporter permease from Escherichia coli ECRC98

 Score = 61.2 bits (147), Expect = 6e-14
 Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 23/283 (8%)

Query: 134 LIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLPSQRNFTVAG 193
           +IAG   +   G+ ++ LG  LA++LN    D + +MV   +     G L    +  + G
Sbjct: 165 IIAGSDLSRVKGD-EITLGSGLAKTLNAKYDDWLDVMVVNTAGGQ--GAL----SLKMRG 217

Query: 194 IFNTG-SDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLAEQPLPQDWQ-- 250
           IF +G  D D   M   L  A +++  D  +     L  DD    S    Q + ++    
Sbjct: 218 IFESGIKDYDDVAMKIPLDTAQRMMGTDGVSKVLILLKEDDTAAFSAKLRQFIERNHLPL 277

Query: 251 -WSDWREQRGELFQAVRMEKNMMGLMLGLIVG-VAAFNIISALIMVVMEKQAEVAILKTQ 308
              DWR+     +Q V    + +   + LIV  +  F I +++ M ++E+  E+  L+  
Sbjct: 278 VVKDWRDV-SLFYQQVEGLLSGIYFFIKLIVALIVIFMIGNSMAMNIVERTREITTLRAI 336

Query: 309 GMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVALFSVGG------S 362
           G++  HV  +F+ +G   GVIGA+   L+G +LA  +N      G+A+    G      +
Sbjct: 337 GLKPLHVTRLFLTEGIFIGVIGAVGSLLVGGVLAWIIN----LYGIAMPPSPGQTIGYTA 392

Query: 363 LPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRY 405
                +P  I + +VL I+ +  A++ PA RAS +  ++A ++
Sbjct: 393 FIKTSNPELIWVTVVLPILTATGASVLPALRASRLNISDAFKF 435