Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 92/412 (22%), Positives = 168/412 (40%), Gaps = 76/412 (18%)

Query: 33  MSTAGITIGVMSLVTVLSVMNGFEAQLKS--RILGV-LPQAVVTEAAGKTTLSATPPDFV 89
           ++  GI +G  ++V +++V +  EAQ  +  R +G  L  A +   AG       P    
Sbjct: 41  LALLGIAVGCGAVVALINVGHNAEAQAMAVFRNMGSDLLVANIQFPAGSQPPRYVPDTLD 100

Query: 90  TALSTQRPPEPLVRSDAVVQSASQLAAG-----LLIGIEPQQNDPIEQHLIAGR-VTALQ 143
           TA   +  P+ L  S  ++ S      G     +++G+ P  +  ++  +  GR ++   
Sbjct: 101 TAALREALPDILAASALIMTSVESRLQGRRFNTMVVGVNPAFSLVLDLRIAQGRFLSQYD 160

Query: 144 AGEYQLFLG-----HLLARSLNVTVGDKVRLMVTEASQFTPLGRLPSQRNFTVAGIFNTG 198
           A      LG      LLA+ + VT+GD+V+L           G L     F V GI    
Sbjct: 161 AHSTHAVLGARVVTELLAKGIPVTLGDRVQLG----------GYL-----FQVVGILQAR 205

Query: 199 SDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA--------EQPLPQ--- 247
                 +M   + D+  +       I G R     P + + LA        EQ  PQ   
Sbjct: 206 GQ--NPMMAVSVDDSILV------PIEGMRRIVPSPQINTLLARNRRSETLEQVAPQLQA 257

Query: 248 -----------DWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVM 296
                      D Q    ++    + Q  R+   ++  + G+ + V    +++ ++M V 
Sbjct: 258 RLQALLPGRQIDVQIP--QQLLAGIAQQSRLFSWLLAGLGGISLLVGGVGVMNVMLMNVA 315

Query: 297 EKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVAL 356
           E++ E+ +    G + + + ++F+++  +    GALVG + G+             G A 
Sbjct: 316 ERRREIGVRMALGARPRDIASLFLLEAVALTAAGALVGAVGGI-------------GAAW 362

Query: 357 F--SVGGSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
           F  +V G     + P  + L +  +++  L   L PA  A+ +QP +ALR E
Sbjct: 363 FFVTVSGWAGFTLSPFSLCLGVGSSVLAGLFFGLTPALSAARLQPVQALRDE 414