Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., Lipoprotein-releasing system transmembrane protein LolC from Azospirillum sp. SherDot2

 Score =  197 bits (500), Expect = 6e-55
 Identities = 130/423 (30%), Positives = 222/423 (52%), Gaps = 30/423 (7%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           +F+     + +RYLR R  + F   ++  S  GI +GV +L+ V++VMNGF A+L  R+L
Sbjct: 2   IFNAFERMVAMRYLRARRQEGFISVIAGFSLLGIALGVATLIIVMAVMNGFRAELLGRVL 61

Query: 65  GVLPQAVVTEAAGKTTLSATPPDF-VTALSTQRPP-----EPLVRSDAVVQSASQLAAGL 118
           G+     V  + G        PDF + A   +  P      P V   A+V      +  +
Sbjct: 62  GLNGHLNVYSSRGGPL-----PDFDILAGKLRNTPGVVNVTPTVEGQALVSVRGVASGAV 116

Query: 119 LIGIEPQQ---NDPIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEAS 175
           + G+  +       +  ++I G V   + GE ++ +G  +A+ L ++VGD++ L+  + +
Sbjct: 117 IRGVRAEDFKVRPTLANNVIRGSVD--EFGEDRVAIGVRMAQRLGLSVGDQITLIAPQGN 174

Query: 176 QFTPLGRLPSQRNFTVAGIFNTGS-DVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDP 234
             T  G +P  R++ +  IF+ G  + D   +   L +A    R     ++   +F  DP
Sbjct: 175 -VTAFGTVPRMRSYPIGAIFDVGMFEYDNSFIFLPLEEAQAFFR-TGDAVTSLEVFVSDP 232

Query: 235 FVVS---QLAEQPLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISAL 291
             ++      +  +  + +  DW++     F A+++E+N+M L+L LI+ VAAFNIIS+L
Sbjct: 233 MQIAAARSAVQSAVAGEGRVVDWQQSNASFFTALQVERNVMFLILSLIIMVAAFNIISSL 292

Query: 292 IMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEA 351
           IM+V +K  ++AIL+T G     ++ IF + GAS GV G L+G  LGV  A N+ S+ + 
Sbjct: 293 IMLVKDKGRDIAILRTMGATRGMIMRIFFLSGASVGVTGTLLGLALGVSFALNIESIRQV 352

Query: 352 L----GVALFSVG----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEAL 403
           +    G  LF+        LP  ID  ++  V ++A+ LS  AT++P++RA+ + P EAL
Sbjct: 353 IQGLTGTNLFNAEIYFLSHLPAKIDWSEVTQVTLMALGLSFAATIYPSWRAARLDPVEAL 412

Query: 404 RYE 406
           RYE
Sbjct: 413 RYE 415