Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., Lipoprotein-releasing system transmembrane protein LolC from Alteromonas macleodii MIT1002

 Score =  286 bits (733), Expect = 6e-82
 Identities = 169/436 (38%), Positives = 263/436 (60%), Gaps = 34/436 (7%)

Query: 5   MFHPISAFIGLRYLRGRSGDR--FSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSR 62
           MF+P+SAFI  RY +     +  F  F++  S AGI +G+M+L+ V+SVMNG E QLK R
Sbjct: 1   MFYPLSAFIAYRYAKSNKASQTSFVSFINRFSVAGIALGLMALIIVVSVMNGLEGQLKQR 60

Query: 63  ILGVLPQAVVTEA----------AGKTTLSATPPDFVTALST-------QRPPEPLV--- 102
           ILG++P   +T+           + +  +  TP        T       + P E +V   
Sbjct: 61  ILGIVPHIEITKTPIISENPSRTSNQNEVKETPTQTAEKTQTVTLKEISKTPIEGVVATM 120

Query: 103 ---RSDAVVQSASQLAAGLLIGIEPQ---QNDPIEQHLIAGRVTALQAGEYQLFLGHLLA 156
               ++AVVQS S L    + G++P+   ++  +  H+  GR + L  G +   +G  LA
Sbjct: 121 AYREAEAVVQSRSDLRGVQVHGVQPEVMIEHTLVASHMEQGRFSDLTEGSFAAIIGRSLA 180

Query: 157 RSLNVTVGDKVRLMVTEASQFTPLGRLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKL 216
             L   VGD++R+MV  AS +TP GR+PSQR  TV G+F+ GS +D ++M  +L+D  +L
Sbjct: 181 IKLEARVGDRLRVMVAGASVYTPFGRMPSQRLVTVVGVFDMGSQMDDKVMYMNLKDVNRL 240

Query: 217 LRYDAQTISGWRLFFDDPF----VVSQLAEQPLPQDWQWSDWREQRGELFQAVRMEKNMM 272
           +R    +    RLF +D F    VVS L ++          WRE++G LF AV+MEKNMM
Sbjct: 241 MRDPKGSEQSLRLFLNDAFNYQAVVSVLTDRVGVSVNNIKTWRERQGPLFDAVKMEKNMM 300

Query: 273 GLMLGLIVGVAAFNIISALIMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGAL 332
            LML LI+ VAAFNI+SAL+MVV EKQ ++A+L+TQGM    V+ IF++ G  +G+ GA 
Sbjct: 301 TLMLLLIIAVAAFNIVSALVMVVTEKQGDIAVLQTQGMLPSSVMWIFVLNGLFNGIKGAG 360

Query: 333 VGGLLGVLLAANLNSLMEALG--VALFSVGGSLPVAIDPLQIVLVIVLAIVLSLLATLFP 390
           +G +LGV++   LN++++ +G  +AL + G  LP+ +D +QIV + +L+++L +LA+++P
Sbjct: 361 IGLVLGVVITLQLNNILDLIGSPLALAADGKGLPIEMDVVQIVGIALLSLLLCVLASVYP 420

Query: 391 AYRASSVQPAEALRYE 406
           A +A  + P++AL+ E
Sbjct: 421 ARKAMKIAPSQALQNE 436