Pairwise Alignments

Query, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  110 bits (275), Expect = 8e-29
 Identities = 106/405 (26%), Positives = 178/405 (43%), Gaps = 53/405 (13%)

Query: 33  GIAVGVAVIIIGLSAMNGFERELQTRVLSVIPH-----------------GEFEG--VRG 73
           GIA+GV VI+   + + G +     RVL+  P                  G FE   V+ 
Sbjct: 29  GIAIGVGVIVFMSAMLAGLQANFIKRVLTSQPQIQLLPPDEVARPLRRGEGVFEAAVVQR 88

Query: 74  PVER------WPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDPQREQAVS 127
           P +R      W  +       P +V AAP      LA  G   ++I + G++P++   + 
Sbjct: 89  PAQRVLSIDQWQAIRDAMRARPDVVVAAPTASGAMLAVRGDASRSITLTGMEPEQYFKIV 148

Query: 128 RLSQFITAQAWQDFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSGDKVQAPKRVRV 187
           R+  +I +    + R G   +++G  +A+ LG  VGD   L + SA +  ++       +
Sbjct: 149 RVPDYIVSG---ELRLGTDDILIGTELAKDLGASVGD--KLNVTSAEARSRI-------L 196

Query: 188 KVSGLLAL-NGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVRDVGNQLN 246
            ++G+  L N   +     + L  AQ+  +L  GVT I + V+D+  A  I +++   L 
Sbjct: 197 TITGIFDLGNKGANQRNTFVALRTAQSLLNLIGGVTTIDLTVSDIYAAETIAQEIEASLP 256

Query: 247 EYVYLHSWQQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDRAGEIAILR 306
             V   SW       +  ++  +    L+ + V    +F I + L+++V  R+ +I ILR
Sbjct: 257 --VQAESWIATNAQFFTAVRAQQNSNTLIRLFVALSVAFGIAAVLIVSVIQRSKDIGILR 314

Query: 307 TMGATDGLIKRIFVWQGVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLIGHQFLSGDIY 366
            MG     I +IF+ QG   G LGS+VGSVLG            G   L  H  L+  + 
Sbjct: 315 AMGTARRQILQIFLIQGGVLGFLGSLVGSVLG-----------AGALMLWHH--LARQVD 361

Query: 367 FVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARRASRLNPAQVL 411
             +  P  +E    V  +  A +  + A   PA RA+ L+P + +
Sbjct: 362 GTELFPLVLEPGLFVAAAAIATLTGVAAGVAPAVRAASLDPVEAI 406