Pairwise Alignments

Query, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

Subject, 869 a.a., AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system from Variovorax sp. SCN45

 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 95/403 (23%), Positives = 172/403 (42%), Gaps = 53/403 (13%)

Query: 28  LSSTIGIAVGVAVIIIGLSAMNGFERELQTRVLSVIPHGEFEGVRGPVERWPDLMAQAAR 87
           L+  +G+A+  +V +I  SA++ F   +  R ++  P  E   V+G  +    + A+ A+
Sbjct: 25  LAVMLGVALAFSVQLINASALDEFSSAV--RSVNGQPDLEVRAVQGGFDE--AVFARIAQ 80

Query: 88  HPQIVAAAPYVKITALA-ESGTQLKAIEVRGVDPQREQAVSRLSQFITAQAWQD----FR 142
           HPQ+  A+P ++   LA  +G +   + V GVD      ++  +    A A  D    F 
Sbjct: 81  HPQVTLASPVLEFQGLALAAGERQVPMRVIGVDALVLPTIAP-ALMPQASAGADRFALFA 139

Query: 143 PGQQQVILGQGVAEKLGVQV----GDFITLMIPSANSGDKVQAPKRVRVKVSGLLALNGQ 198
           PG   V L       LG+      G   T+ +    SGD  +     R+ V+G +A  G 
Sbjct: 140 PGH--VFLNNAARSALGLPAQAAGGAAETVQL---RSGDAWR-----RLDVAGHVAAGGT 189

Query: 199 IDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVRDVGNQLN-----EYVYLHS 253
              +LA++ +  AQ        ++ I +++A        +  +          ++     
Sbjct: 190 ---ALAVMDIAAAQELFGQIGQLSRIDLRLAPGTDRAAFMASLRQSPGWPAGVQFAEPGD 246

Query: 254 WQQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDRAGEIAILRTMGATDG 313
             ++   L R  ++  T++ LV +      +F + S L ++V  RA + A+L  +G T  
Sbjct: 247 AAERVSNLSRAYRVNLTVLALVALFT---GAFLVFSVLALSVAKRAQQFALLGVLGLTPR 303

Query: 314 LIKRIFVWQGVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLIGHQFLSGDI---YFVDF 370
              R+ + + +  G++GS  G  LG  +A                + L GD+   YF   
Sbjct: 304 ERLRLVLAESLVLGLIGSAAGLALGTALA------------AFALRVLGGDLGGGYFEGV 351

Query: 371 LPSQVEWAD--VVLVSGTAIVLSLLATWYPARRASRLNPAQVL 411
            P ++ W+     L  G  ++ +L+  W+PAR A  L  AQ L
Sbjct: 352 AP-KLHWSAGAAALYGGLGVLAALVGGWWPARAAQALPEAQTL 393