Pairwise Alignments

Query, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  202 bits (513), Expect = 2e-56
 Identities = 126/412 (30%), Positives = 214/412 (51%), Gaps = 3/412 (0%)

Query: 2   FSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVLS 61
           FS+    +  R+ R++++   +S I+  S +GI +GVA +II ++ MNGF  EL +R+L 
Sbjct: 22  FSAFERMVAWRYLRSRRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELISRILG 81

Query: 62  VIPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAES-GTQLKAIEVRGVDP 120
           +  H   + +  P   + +L  + +  P +  A P V+   LA   G       VRGV  
Sbjct: 82  INGHMIVQPIDQPFNNYDELAKKFSAVPGVTMALPLVEGQTLASGRGGAGSGALVRGVRQ 141

Query: 121 QREQAVSRLSQFITAQAWQDFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSGDKVQ 180
           +    +  ++  I       F  G   V++G  +A +LGV  GD ITL+ P  +      
Sbjct: 142 EDIDKIKEVATNIKTGDLVGFMAGDG-VLVGSRLASQLGVTAGDDITLISPEGDVTPMGI 200

Query: 181 APKRVRVKVSGLLALN-GQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
            P+    K+SG+  +   + D S+  +PL +AQ Y +    V  I + V+       I  
Sbjct: 201 NPRVKSYKISGVFEIGMSEYDASMIYMPLSEAQLYFNANGIVQSIELYVSRPDDVDGIRP 260

Query: 240 DVGNQLNEYVYLHSWQQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDRA 299
            V       +Y+  W+Q+    +  +Q+ R +M++++ L++ VA+ NI+S L+M VKD+ 
Sbjct: 261 LVEQAAERQIYITDWRQRNQTFFSALQVERNVMFMILTLIVLVAALNIISGLIMLVKDKG 320

Query: 300 GEIAILRTMGATDGLIKRIFVWQGVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLIGHQ 359
            +IAILRTMGA+ G + RIF   G   G +G+  G  LG++V  N+  + +    + G  
Sbjct: 321 SDIAILRTMGASSGAVMRIFFMTGAAIGTVGTFAGVALGVLVCLNVESIRQFFSWVSGTV 380

Query: 360 FLSGDIYFVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARRASRLNPAQVL 411
                +YF+  LP++++ ++ + V   A+ LS LAT +PA RAS+L+P Q L
Sbjct: 381 LFDPQLYFLSQLPAEMDLSETITVVIMALTLSFLATIFPAWRASKLDPVQAL 432