Pairwise Alignments

Query, 752 a.a., DNA internalization-related competence protein ComEC/Rec2 from Vibrio cholerae E7946 ATCC 55056

Subject, 822 a.a., DNA internalization-related competence protein ComEC/Rec2 from Variovorax sp. SCN45

 Score =  218 bits (555), Expect = 1e-60
 Identities = 187/630 (29%), Positives = 292/630 (46%), Gaps = 62/630 (9%)

Query: 134 LQPNDRVEFSVTLKPIVGRLNQTGFDLEAHYMAQSVVARAVVKPDTAYQIVQE------- 186
           L   +R   +V LK   G +N  GFD E     Q + A   V+  T   + +        
Sbjct: 175 LHAGERWRLAVRLKAPHGNVNPFGFDGELWAWEQGIQANGYVRAGTRDAVPERIAVTWLH 234

Query: 187 ------SGIRSSLFFELEQLTHTSPYQGLILALTFGERKGIDEQEWQALRNSGLIHLVAI 240
                   +R ++F  +          G+I AL  G+++ ID   W   R +G+ HL++I
Sbjct: 235 PVERAREAVRDAIFERVPDRARA----GVIAALVTGDQQAIDRAGWDVFRATGVAHLMSI 290

Query: 241 SGLHIGI-AFSVGYFLGLGMMRFHAQLLWSP-----FVCGALLAVLYAWLAGFTLPTQRA 294
           SGLH+ + A+     +G    R    +L  P      V G LLA LYA  +G+ +P+QR 
Sbjct: 291 SGLHVTMFAWLASRVVGWLWRRSPRLMLGLPAQQAALVGGVLLAGLYALFSGWGVPSQRT 350

Query: 295 LIMCLLNVALIMLAFPLSALKRI-LLTLVAVLLWSPFASLSNSFWMSFLAVAIVLYQLAS 353
           + M L  VA++ L         + LLT   V+   P+A +   FW+SF+AV ++    AS
Sbjct: 351 VWM-LATVAVLRLTGRRWPWPHVWLLTAAVVVALDPWALMQAGFWLSFVAVGVLFATDAS 409

Query: 354 --------QSQRQVWWKALLWAQVFLVCLMAPVTAYFFGGLSVTAVLYNLVFIPWFSLVI 405
                    S R + +    W    +   +AP++   F  +S+  +L N V IPW +LV+
Sbjct: 410 VPGEPRAGASSRLLGFFREQWV---ITLALAPLSLLLFQQVSLVGLLANAVAIPWVTLVV 466

Query: 406 VPALFLGLLLMVVWPSVAAAYWPW---VDWTF-LPLDWALQFADVGWWVVPSKVQGVVAA 461
            P   LG+    +W + A A       + W   LPL   L  A   WW+    V G    
Sbjct: 467 TPLAMLGVAFAPLWDAAAWAVHVLSVLLQWCAGLPLA-TLSMATPPWWMAACGVGGG--- 522

Query: 462 SVAILLLYRFMSLKACSLLLGMIGLWWWFPS-LTPLWRMDVLDVGHGLAIVIEQDERAIV 520
             A+L +    SL+A  +   +  L W  P   T  + +   D+G G A+++     +++
Sbjct: 523 --ALLAMRLPWSLRAVGVPFLLPVLLWQAPRPATGEFELLAADIGQGNAVLVRTATHSLL 580

Query: 521 YDTGSSWPGGSYV-QSVIEPMLQQRGLRQVDGVILSHLDNDHAGDWQGL----AERWQPN 575
           YDTG  +   S     V+ P+L+  G R +D ++LSH D DH G  Q +    A+    +
Sbjct: 581 YDTGPRYSLESDAGHRVLVPLLRAYGER-LDMLVLSHRDTDHTGGAQAVLAMQAQAELLS 639

Query: 576 WIRASQLGTEFMP---CIRGESWQWQSLHFTVLWPPQ----AVSRAYNQHSCVIRMTDTQ 628
            I AS       P   C  G+ W W  + F VL P      A +   N  SCV+R+ + +
Sbjct: 640 SIEASHALQALRPAKRCEAGQRWHWDGVDFEVLHPEADDYPAFTAKPNAVSCVLRIGNGR 699

Query: 629 SNHSVLLSGDVTAMGEWLLARDGAQLQSEVMIVPHHGSKTSSTAEFIAQVNPKLAIASVA 688
           +  + LL+GDV  + E  L     +L+++V++VPHHGSKTSS+  F+  V P++A+    
Sbjct: 700 A--AALLAGDVERLQEAALIARTPRLRADVLLVPHHGSKTSSSETFLDAVQPRIALVQAG 757

Query: 689 KDNRWNLPNPQVVARYQAQQVEWLDTGHAG 718
             NR+  P P+V ARY A  V  +D+   G
Sbjct: 758 YRNRFGHPAPEVSARYAAHGVRLVDSPRCG 787



 Score = 25.8 bits (55), Expect = 0.010
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 241 SGLHIGIAFSVGYFLGLGMMRFHAQLLWSPFVCGALLAVLYAWL 284
           +G  +G     G  LG  + +     LW  +V  ALL V  AWL
Sbjct: 11  AGGSLGFVALAGSLLGAAL-QLQQPALWPAWVYAALLLVAIAWL 53