Pairwise Alignments

Query, 752 a.a., DNA internalization-related competence protein ComEC/Rec2 from Vibrio cholerae E7946 ATCC 55056

Subject, 864 a.a., ComEC family competence protein from Alteromonas macleodii MIT1002

 Score =  209 bits (531), Expect = 6e-58
 Identities = 182/685 (26%), Positives = 293/685 (42%), Gaps = 85/685 (12%)

Query: 134 LQPNDRVEFSVTLKPIVGRLNQTGFDLEAHYMAQSVVARAVVKPDTAYQIVQESGIRSSL 193
           L   D     V LKP  G  N  G   +   ++Q + A   +K     +      +R  L
Sbjct: 179 LHNGDTFTAIVKLKPAYGTANPVGASRQQQLVSQFIHATGYIKSIEHDKTKHNHSVRYEL 238

Query: 194 FFELEQL--THTSPYQGLILALTFGERKGIDEQEWQALRNSGLIHLVAISGLHIGIAFSV 251
              L++L   H   ++ L+L    G++ G    +W  L+ +G  H+ +ISG+H+ +   V
Sbjct: 239 ATTLQKLDLVHEKWWRALLL----GDKTGFTLGDWTLLQRTGTGHMFSISGMHLSLIAGV 294

Query: 252 G--YFLGLGMMRFHAQLL------W---------------------------SPFVCGAL 276
              +F  +  +  H   L      W                           S  +  ++
Sbjct: 295 CLLFFNPVIFLLTHVTSLLGRAKYWLVRSASINYPATGRKNRVREISKMFQTSAPIRASV 354

Query: 277 LAVL------YAWLAGFTLPTQRALIMCLLNVALIMLAFPLSALKRILLTLVAVLLWSPF 330
           L VL      YA L+G  LP  RALI+  +   L +       +   L  L + LL  P 
Sbjct: 355 LCVLIVACFCYALLSGSALPVVRALILVTMGCVLSLTRHAWRPVNVALTMLTSSLLLFPL 414

Query: 331 ASLSNSFWMSFLAVAIVLYQLASQS-QRQVWWKALLWAQVFLVCLMAPVTAYFFGGLSVT 389
           + L  SF++S  AV  + + +     QR  W+ +L   QV L  +M P+T  +FG  S  
Sbjct: 415 SILGASFYLSIGAVLCIWFLVVVWGLQRAPWYVSLFKLQVALTVIMMPLTLIWFGSASFV 474

Query: 390 AVLYNLVFIPWFSLVIVPALFLGLLLM--VVWPSVAAAYWPWVDWTFLPLDWALQFADVG 447
           AV+ NL+ +P  SL++ P   + LL++     P         + ++ + L + L   +V 
Sbjct: 475 AVVTNLIALPVISLLL-PICLISLLVLHFAELPFAQQVTGMLMHYSDVCLGYLLSLLNVL 533

Query: 448 WWVVPSKVQGVVAASVAILLL----------YRFMSLKACSLLLGMIGLWW-WFPSLTPL 496
                S +   V++  A+ L+          +R+ ++    LLL  + ++  W P    +
Sbjct: 534 SQFSGSAINFYVSSGAALCLIVAFFIFLLPTWRYKAICVALLLLPSLSIFQKWLPINESI 593

Query: 497 WRMDVLDVGHGLAIVIEQDERAIVYDTGSSWPGGSYVQSV-IEPMLQQRGLRQVDGVILS 555
           W + V D G   AI +    RA++ D+G+ + G ++  +  + P L+ + +  +D V+ +
Sbjct: 594 WALHVFDAGQASAIAVTAGGRAMIIDSGAQFNGNAHTATKHLLPFLESKHISNIDVVVHT 653

Query: 556 HLDNDHAGDWQGLAERWQPNWIRASQLGTEFMPCIRGESWQWQSLHFTVLWPPQAVSRAY 615
           H DNDHAG   G     Q    + +   T  + C RG+  +WQ+L    LWPP       
Sbjct: 654 HSDNDHAG---GAVAIEQHALAKKATFYTPTLGCERGKRIRWQNLTINFLWPPNGNKEDN 710

Query: 616 NQHSCVIRMTDTQSNHSVLLSGDVTAMGEWLLAR--------DGAQ---------LQSEV 658
           N  SCV+++T      SVL+ GD+    E+ L          +GA          L +++
Sbjct: 711 NAMSCVVKITSDAG--SVLIPGDIEKTSEYALITREIMDGFSEGASMDTLASTTNLSADI 768

Query: 659 MIVPHHGSKTSSTAEFIAQVNPKLAIASVAKDNRWNLPNPQVVARYQAQQVEWLDTGHAG 718
           +I PHHGSKTSST  FI  V PK  I +   +NRW  P   V  RY+   V    T + G
Sbjct: 769 LIAPHHGSKTSSTNVFIEHVAPKAVIFTQGYENRWQFPAYVVAKRYERLGVTQYLTSYHG 828

Query: 719 QISLFFYLDQLDWFTQRSLGWQPWY 743
            IS  F  D     +QR      WY
Sbjct: 829 YISATFDKDSFHIDSQRGTLNNRWY 853