Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., lipid A export permease/ATP-binding protein MsbA from Rhodanobacter sp000427505 FW510-R12

 Score =  479 bits (1233), Expect = e-139
 Identities = 248/575 (43%), Positives = 371/575 (64%)

Query: 6   DESNWQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLR 65
           D  + + +KRL  Y R Y A  +++ + + ++        +LL+P+ DE F N +   + 
Sbjct: 10  DAESRRVYKRLLGYTRPYWAVGLIALVGMAVDGGGLAVFTNLLRPMFDELFLNKDPYLIF 69

Query: 66  ILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLL 125
            +P  IL +  +RG+  F SSY +S++  N+V  ++  +F  ++ +P  FF +E +G  +
Sbjct: 70  WMPIWILAIFAIRGIGTFVSSYGISYIGRNIVQAIQHDVFASYLRLPATFFGREPSGQQI 129

Query: 126 SRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFV 185
           SRITY SEQVA A++ A+   V EG ++IG+  +M  NS  L+L L+V+ P +    + V
Sbjct: 130 SRITYTSEQVASASTDAVKIAVTEGVTVIGMFYVMLHNSAYLTLALLVMIPAIMLIATVV 189

Query: 186 SKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLV 245
           S+R+R+ISR +Q +MG VT + E+ +  H+ V  YGGQ+ E  RFD+V++  R+  +K+ 
Sbjct: 190 SRRYRQISRRIQGSMGSVTGTVEESVGAHREVRIYGGQQHEATRFDEVTHRARRLNLKIA 249

Query: 246 SAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVT 305
           +  + +   IQ +A+ AL  ++FL +   +  +++ G F  V +AM  +M  LK L +V 
Sbjct: 250 ATNASSSTAIQTVAAFALAVLVFLGTRPGVIDQISSGVFIAVLTAMGAMMPSLKRLATVQ 309

Query: 306 SEFQRGMAACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFS 365
           +  QRG++A + LFG++D+  E D G  E  R  G++  +DV  TY   +  AL  V   
Sbjct: 310 ANIQRGISAAEDLFGVIDMPPELDQGSRELTRTRGDLRFEDVRLTYPRNDFEALRGVDLH 369

Query: 366 IPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQN 425
              G   ALVGRSGSGKS++ +L  RFY+  +G I LDG D R+Y L +LRR  A V Q+
Sbjct: 370 CTPGTVTALVGRSGSGKSSLVSLLPRFYEPSAGRIVLDGEDYREYTLASLRRQIAWVGQS 429

Query: 426 VHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485
           V LF+DT+ANNIAY      +  +I  AA  A+AMEFI  +PQG+ T +G++G +LSGGQ
Sbjct: 430 VVLFDDTVANNIAYGELAGASEAEIVAAAEAANAMEFIARLPQGIHTPVGQSGNTLSGGQ 489

Query: 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQA 545
           RQR+AIARA+L++AP+L+LDEATSALDTESE+ IQ AL  L +++T LVIAHRLST+E A
Sbjct: 490 RQRIAIARAILKNAPILVLDEATSALDTESEQLIQQALQRLMRDRTTLVIAHRLSTVEGA 549

Query: 546 DEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQF 580
           D+I V+++G IIERG HA+L+A DG YA LHR+QF
Sbjct: 550 DQIAVMEQGTIIERGTHAELVALDGQYAALHRMQF 584