Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 590 a.a., ABC transporter transmembrane domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  304 bits (779), Expect = 6e-87
 Identities = 183/572 (31%), Positives = 307/572 (53%), Gaps = 7/572 (1%)

Query: 14  KRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILG 73
           + LW +++ ++A  +   + L +++ A   +    + ++D+GFG++ +  +      + G
Sbjct: 19  RELWPFLKPHRALALGWLLFLALSSGASLVLPLAFRHIIDQGFGHSSNTVINQTFVALFG 78

Query: 74  LMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSE 133
           +  V   +  A  +C++ +S   +  +R+ L+ H + + V FF++   G LLSR++ D+E
Sbjct: 79  VALVLAFATAARYFCITLLSERALASLRQTLYAHVIRLDVGFFEKSRVGELLSRLSADTE 138

Query: 134 QVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKIS 193
            V       +   +R    ++G    M W +  L+ +  +V P V   I    +R +K+S
Sbjct: 139 VVQALIGSGVSVALRSAVMLVGAAVAMVWTAPSLAGLTALVIPAVMLPILVFGRRVQKLS 198

Query: 194 RNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADP 253
           R  Q  +    + A + L     V +Y  +++E  R+            + +  +++   
Sbjct: 199 RASQDRLADAAAIANETLNASTAVKAYAREDIESSRYGGAITRALATARRRIGMRALLTM 258

Query: 254 VIQMIASLALFAVLFLASVDSIRAELTPGTF-TVVFSAMFGLMRPLKALTSVTSEFQRGM 312
            + ++   A+  VL+  +   +   L  G     V  A+F     +  L+ V  +  R  
Sbjct: 259 AVIVLVFGAITLVLWAGARHVLAGTLGAGVLGQFVLYAVFAA-GSVAGLSEVWGDVLRAA 317

Query: 313 AACQTLFGLMDLETERDNGKYEA---ERVNGEVDVKDVTFTYQGKEKPALSH-VSFSIPQ 368
            A + +  L+    +  + +      + + GE+    VTF Y  +   A  H  + ++  
Sbjct: 318 GAMERIGELLGERADIVDPRQPRALPQPMRGELRFDGVTFHYPTRPDTAALHDFTLTVHP 377

Query: 369 GKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHL 428
           G+TVALVG SG+GKST+ +L  RFYD  SGSI +DG D+R+  L  LR   ALV Q   +
Sbjct: 378 GETVALVGPSGAGKSTVFSLLLRFYDPQSGSIRIDGVDLRETTLAGLRGAIALVPQETVI 437

Query: 429 FNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQR 488
           F  + A+NI +  + +   +++ +AAR A A EFI  +  G D  +GE G  LSGGQRQR
Sbjct: 438 FAGSAADNIRFGRQ-DAGDDEVREAARAAEAHEFIGALDHGYDAELGERGVRLSGGQRQR 496

Query: 489 VAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEI 548
           +AIARA+LRDAP+L+LDEATSALD +SE AIQ AL  L++ +T LVIAHRL+T+++AD I
Sbjct: 497 IAIARAILRDAPLLLLDEATSALDAQSEAAIQQALARLEQGRTTLVIAHRLATVQRADRI 556

Query: 549 LVVDEGEIIERGRHADLLAQDGAYAQLHRIQF 580
           +V+D G I+ +G H  LLA+ G YA+L R+QF
Sbjct: 557 VVMDGGRIVAQGTHESLLAEGGLYAELARLQF 588